Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 MTCO3P46-201ENST00000425787 232 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AC119618.1-201ENST00000434191 222 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 BNIP3P2-201ENST00000441221 577 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 HMGB1P15-201ENST00000453854 435 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AC020893.1-201ENST00000502452 580 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 HSPD1P15-201ENST00000505573 1122 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 SNORA70.18-201ENST00000516696 98 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AC105029.1-201ENST00000520250 669 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 PSMA2P1-201ENST00000526365 646 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 OR4P1P-201ENST00000530808 1136 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AC106785.1-201ENST00000565935 262 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AC010928.3-201ENST00000587712 541 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AC010525.2-201ENST00000590920 195 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AC078795.3-201ENST00000602913 472 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AL034351.1-201ENST00000605288 668 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 uc_338.12-201ENST00000616344 181 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 AC112204.3-201ENST00000623822 332 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 MIR6715B-201ENST00000637172 77 ntBASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
ZNF549Q6P9A3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AC068647.1-201ENST00000489539 2265 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AC009902.3-201ENST00000606235 2172 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AC007685.1-201ENST00000329806 452 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 SNORD9-201ENST00000362566 104 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 SNORA51.2-201ENST00000364595 132 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 RNA5SP235-201ENST00000365411 114 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 RNU6-1227P-201ENST00000383981 107 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 Y_RNA.460-201ENST00000384255 102 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 RNU6-373P-201ENST00000411247 98 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 RPS15AP12-201ENST00000419498 388 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AL353678.1-201ENST00000422735 741 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 TIMM9P1-201ENST00000436122 256 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AC108734.1-201ENST00000439549 399 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 MTCYBP6-201ENST00000441810 138 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 NOTCH2P1-201ENST00000443481 624 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 MRPL50P4-201ENST00000446432 475 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 ANP32BP2-201ENST00000454525 545 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AL356010.1-201ENST00000456364 102 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 RPL23AP41-201ENST00000484754 458 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 NIPA2P2-201ENST00000496376 1083 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 HMGN1P13-201ENST00000505795 138 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AC026784.1-201ENST00000507986 352 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 SNORD60.2-201ENST00000516883 86 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 RANP9-201ENST00000519957 271 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AC024224.1-201ENST00000538284 609 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AC060771.1-201ENST00000582031 164 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 YWHAQP7-201ENST00000603536 658 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AC004825.2-201ENST00000616634 455 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 C2orf27A-204ENST00000623058 969 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AC090617.10-201ENST00000624308 134 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 PWAR6-201ENST00000552334 4618 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AC008725.1-201ENST00000605123 2263 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 AL133412.1-201ENST00000380194 2992 ntBASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ZNF549Q6P9A3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF549Q6P9A3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
ZNF549Q6P9A3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
ZNF549Q6P9A3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.53□□□□□ -1.84
ZNF549Q6P9A3 Y_RNA.22-201ENST00000362492 102 ntBASIC3.53□□□□□ -1.84
ZNF549Q6P9A3 Y_RNA.58-201ENST00000362807 102 ntBASIC3.53□□□□□ -1.84
ZNF549Q6P9A3 Y_RNA.154-201ENST00000363624 102 ntBASIC3.53□□□□□ -1.84
ZNF549Q6P9A3 RNY3P1-201ENST00000365085 102 ntBASIC3.53□□□□□ -1.84
ZNF549Q6P9A3 RNY3-201ENST00000365484 102 ntBASIC3.53□□□□□ -1.84
ZNF549Q6P9A3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
ZNF549Q6P9A3 RNU6-1279P-201ENST00000383917 103 ntBASIC3.53□□□□□ -1.84
ZNF549Q6P9A3 Y_RNA.490-201ENST00000384413 102 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 171.1 ms