Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
KRT40Q6A162 RNU6-511P-201ENST00000363496 107 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 SNORA51.2-201ENST00000364595 132 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 RNU4-48P-201ENST00000365559 182 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 Y_RNA.419-201ENST00000384041 102 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KRT40Q6A162 HLFP1-201ENST00000402375 499 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 RN7SKP32-201ENST00000410167 303 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.43□□□□□ -1.7
KRT40Q6A162 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.43□□□□□ -1.7
KRT40Q6A162 AL645937.1-202ENST00000421799 937 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 RPL35AP12-201ENST00000425362 338 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.43□□□□□ -1.7
KRT40Q6A162 ATP5JP1-201ENST00000431631 322 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 MTATP6P16-201ENST00000434543 526 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 RPS20P1-201ENST00000434853 354 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.43□□□□□ -1.7
KRT40Q6A162 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.43□□□□□ -1.7
KRT40Q6A162 PRDX3P3-201ENST00000447765 522 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.43□□□□□ -1.7
KRT40Q6A162 EIF4A1P11-201ENST00000451239 222 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.43□□□□□ -1.7
KRT40Q6A162 AC010683.1-201ENST00000473673 378 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 TRBV12-2-201ENST00000489763 344 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT40Q6A162 COX7A2P2-201ENST00000505291 250 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.43□□□□□ -1.7
KRT40Q6A162 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT40Q6A162 TMEM248P1-201ENST00000510579 951 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 AC074250.1-201ENST00000511117 192 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 RAC1P2-201ENST00000511164 579 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.43□□□□□ -1.7
KRT40Q6A162 RNA5SP208-201ENST00000516156 78 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 NARSP2-201ENST00000518524 679 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 BTF3P12-201ENST00000519620 469 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 AP005435.4-201ENST00000529514 284 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.43□□□□□ -1.7
KRT40Q6A162 AC011611.1-201ENST00000552179 197 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.43□□□□□ -1.7
KRT40Q6A162 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.43□□□□□ -1.7
KRT40Q6A162 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.43□□□□□ -1.7
KRT40Q6A162 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.43□□□□□ -1.7
KRT40Q6A162 AC010928.3-201ENST00000587712 541 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 AC002550.2-201ENST00000621246 394 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 AC079684.1-201ENST00000621405 437 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 AC091925.2-201ENST00000625059 256 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 TPTEP1-208ENST00000636884 213 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KRT40Q6A162 PHKBP1-201ENST00000450951 1951 ntBASIC4.43□□□□□ -1.7
KRT40Q6A162 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.43□□□□□ -1.7
KRT40Q6A162 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
KRT40Q6A162 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
KRT40Q6A162 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
KRT40Q6A162 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
KRT40Q6A162 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.42□□□□□ -1.7
KRT40Q6A162 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRT40Q6A162 MTND4P35-201ENST00000604257 1375 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KRT40Q6A162 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT40Q6A162 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KRT40Q6A162 RNA5SP97-201ENST00000365006 84 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 MIR558-201ENST00000384920 94 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 MIR514A2-201ENST00000385131 88 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 MIR514A3-201ENST00000385132 88 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 MIR634-201ENST00000385208 97 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT40Q6A162 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.42□□□□□ -1.7
KRT40Q6A162 AL365400.1-201ENST00000431854 640 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.42□□□□□ -1.7
KRT40Q6A162 SNORA71B-202ENST00000439232 272 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT40Q6A162 AL049714.1-201ENST00000466686 347 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT40Q6A162 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 RN7SKP277-201ENST00000516895 283 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 RNU6-1314P-201ENST00000517139 104 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT40Q6A162 IGKV2D-36-201ENST00000518643 226 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.42□□□□□ -1.7
KRT40Q6A162 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT40Q6A162 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.42□□□□□ -1.7
KRT40Q6A162 AC078795.3-201ENST00000602913 472 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 MIR486-1-201ENST00000612171 68 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.42□□□□□ -1.7
KRT40Q6A162 AC015967.1-201ENST00000619893 476 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 AL160413.1-201ENST00000622780 310 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT40Q6A162 MIR1302-1-201ENST00000637932 143 ntBASIC4.42□□□□□ -1.7
KRT40Q6A162 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KRT40Q6A162 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.42□□□□□ -1.7
KRT40Q6A162 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
KRT40Q6A162 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
KRT40Q6A162 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
KRT40Q6A162 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.41□□□□□ -1.7
KRT40Q6A162 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.41□□□□□ -1.7
KRT40Q6A162 AC004972.1-201ENST00000623934 2209 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
KRT40Q6A162 U3.11-201ENST00000364476 212 ntBASIC4.41□□□□□ -1.7
KRT40Q6A162 RNU6-1227P-201ENST00000383981 107 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms