Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF20Q5VTR2 AC091905.4-201ENST00000623432 202 ntBASIC5.79□□□□□ -1.48
RNF20Q5VTR2 AL596275.2-204ENST00000641628 552 ntBASIC5.79□□□□□ -1.48
RNF20Q5VTR2 AL596275.2-206ENST00000641957 626 ntBASIC5.79□□□□□ -1.48
RNF20Q5VTR2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF20Q5VTR2 DHX9P1-201ENST00000436565 3076 ntBASIC5.79□□□□□ -1.48
RNF20Q5VTR2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF20Q5VTR2 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF20Q5VTR2 SMG1P6-201ENST00000532337 2930 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF20Q5VTR2 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RNF20Q5VTR2 RNY1P16-201ENST00000363063 111 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 RNU6-371P-201ENST00000364283 108 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 RNU6-200P-201ENST00000364743 107 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 MIR135A2-201ENST00000384854 100 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 AL445529.1-201ENST00000398713 389 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 HSPE1P8-201ENST00000406997 288 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF20Q5VTR2 AL590135.1-201ENST00000422215 156 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 AC139712.2-201ENST00000424302 339 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 PIGPP3-201ENST00000425307 415 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF20Q5VTR2 RPS17P8-201ENST00000434525 335 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 AC093414.1-201ENST00000434712 514 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 RPL37P6-201ENST00000460682 294 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 RPL23AP56-201ENST00000460778 453 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
RNF20Q5VTR2 AC012158.1-204ENST00000483430 465 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF20Q5VTR2 RNU6-789P-201ENST00000517105 102 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 AC090151.1-201ENST00000520784 730 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.78□□□□□ -1.48
RNF20Q5VTR2 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.78□□□□□ -1.48
RNF20Q5VTR2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.78□□□□□ -1.48
RNF20Q5VTR2 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.78□□□□□ -1.48
RNF20Q5VTR2 AL160281.1-201ENST00000605307 311 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 MIR8069-1-201ENST00000616627 86 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 MIR8069-2-201ENST00000621412 86 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.78□□□□□ -1.48
RNF20Q5VTR2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RNF20Q5VTR2 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
RNF20Q5VTR2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RNF20Q5VTR2 AC126323.6-202ENST00000568092 3511 ntBASIC5.78□□□□□ -1.48
RNF20Q5VTR2 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 RN7SKP95-201ENST00000362860 303 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 RNU6-263P-201ENST00000363811 107 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 RNU6-146P-201ENST00000384602 108 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 MIR1178-201ENST00000408396 91 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 AC114755.2-201ENST00000413520 361 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 RPL23AP27-201ENST00000415161 451 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 BX842559.1-201ENST00000419615 532 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 AC004866.2-201ENST00000438285 481 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 PTMAP6-201ENST00000439110 327 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 RPL31P60-201ENST00000478450 367 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 MTND3P25-201ENST00000509243 135 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 RNA5SP392-201ENST00000516905 112 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 RNU7-4P-201ENST00000516961 62 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 RNU6-897P-201ENST00000517135 105 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 AC012433.1-201ENST00000588916 398 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 MIR15A-201ENST00000607334 83 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 AC064801.1-201ENST00000612025 407 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 MIR1244-1-201ENST00000612829 85 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 AL450472.3-201ENST00000615578 367 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 AL022401.1-201ENST00000619498 108 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 MIR1244-3-201ENST00000635744 85 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 MIR1244-2-201ENST00000636449 85 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 MIR1244-4-202ENST00000636813 85 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.77□□□□□ -1.49
RNF20Q5VTR2 NEAT1-202ENST00000501122 22743 ntBASIC5.77□□□□□ -1.49
RNF20Q5VTR2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF20Q5VTR2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF20Q5VTR2 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
RNF20Q5VTR2 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RNF20Q5VTR2 SNORA19-201ENST00000384737 128 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 AL030996.1-201ENST00000411430 235 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.76□□□□□ -1.49
RNF20Q5VTR2 BX510359.3-201ENST00000422168 306 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 AC006946.1-201ENST00000429106 328 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 AL132765.1-201ENST00000434165 553 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 AC073063.1-201ENST00000434352 607 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 AC004938.1-201ENST00000438468 308 ntBASIC5.76□□□□□ -1.49
RNF20Q5VTR2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms