Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF220Q5VTB9 RPL23AP26-201ENST00000412728 464 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AC092809.3-201ENST00000415453 231 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 MTCYBP8-201ENST00000422855 651 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AL596276.1-201ENST00000434465 418 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AC092573.2-201ENST00000434546 243 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF220Q5VTB9 PIGFP3-201ENST00000441918 722 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 DPPA3P1-201ENST00000448050 469 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AL162151.2-201ENST00000448875 158 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.88□□□□□ -1.79
RNF220Q5VTB9 CACYBPP2-201ENST00000453625 678 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AL162395.1-201ENST00000457882 422 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 MTCO3P38-201ENST00000468910 766 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 RPS29P22-201ENST00000472363 168 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 RPS29P19-201ENST00000479709 171 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AC026784.1-201ENST00000507986 352 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 RBBP4P6-201ENST00000508098 202 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 RN7SKP219-201ENST00000516825 296 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 RNU6-685P-201ENST00000517088 95 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 TRAV8-5-201ENST00000537369 341 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF220Q5VTB9 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF220Q5VTB9 TRAV28-201ENST00000557548 323 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 MIR4801-201ENST00000582704 82 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 MIR4443-201ENST00000585052 53 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.88□□□□□ -1.79
RNF220Q5VTB9 BNIP3P9-201ENST00000603714 553 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AC098826.3-201ENST00000603823 466 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AC104458.1-201ENST00000608243 463 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF220Q5VTB9 YWHAEP7-203ENST00000622054 312 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AC004972.1-201ENST00000623934 2209 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF220Q5VTB9 AC002546.1-201ENST00000588041 2504 ntBASIC3.88□□□□□ -1.79
RNF220Q5VTB9 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF220Q5VTB9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF220Q5VTB9 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AL353746.1-201ENST00000566293 6881 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AL139276.1-201ENST00000311910 1001 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 Y_RNA.89-201ENST00000363031 102 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 Y_RNA.245-201ENST00000364493 95 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 RN7SKP285-201ENST00000410137 318 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 RNU6-908P-201ENST00000410160 94 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AC080125.1-201ENST00000414888 684 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 MTND1P23-201ENST00000416931 372 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AL451062.2-201ENST00000427515 271 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 RPL23AP46-201ENST00000438548 490 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AL500522.2-201ENST00000448562 343 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AC073415.1-201ENST00000449240 153 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 RPL7P5-201ENST00000471472 736 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 KC877373.1-201ENST00000479066 408 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AC092436.1-201ENST00000506450 503 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AC098591.2-201ENST00000510152 315 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 RNA5SP401-201ENST00000515920 127 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 RNU6-1282P-201ENST00000516735 96 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 RNU6-143P-201ENST00000516942 93 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 RNA5SP471-201ENST00000516971 106 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 OR5B10P-201ENST00000532869 642 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 MIR3186-201ENST00000577404 85 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AP000907.4-201ENST00000604143 237 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AL161798.1-201ENST00000604630 131 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AC009570.1-201ENST00000609599 745 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AP005264.7-201ENST00000625003 745 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RNF220Q5VTB9 AL158163.1-201ENST00000603915 1649 ntBASIC3.87□□□□□ -1.79
RNF220Q5VTB9 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
RNF220Q5VTB9 RIOK3P1-201ENST00000418778 1528 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 RNA5SP447-201ENST00000363749 119 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 RNU6-512P-201ENST00000364438 103 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 RNU6-877P-201ENST00000383868 107 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 FAT1P1-201ENST00000406588 507 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 RNA5SP36-201ENST00000410197 133 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 RPL7P46-201ENST00000425129 740 ntBASIC3.86□□□□□ -1.79
RNF220Q5VTB9 AC002075.2-201ENST00000425207 252 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms