Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNU6-22P-201ENST00000384355 107 ntBASIC6.05□□□□□ -1.44
RC3H1Q5TC82 RNU6-516P-201ENST00000411381 104 ntBASIC6.05□□□□□ -1.44
RC3H1Q5TC82 AL354766.1-201ENST00000423396 542 ntBASIC6.05□□□□□ -1.44
RC3H1Q5TC82 AC004866.2-201ENST00000438285 481 ntBASIC6.05□□□□□ -1.44
RC3H1Q5TC82 RPL23AP24-201ENST00000458203 385 ntBASIC6.05□□□□□ -1.44
RC3H1Q5TC82 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.05□□□□□ -1.44
RC3H1Q5TC82 RNU6-479P-201ENST00000516348 105 ntBASIC6.05□□□□□ -1.44
RC3H1Q5TC82 Z83818.1-201ENST00000603584 150 ntBASIC6.05□□□□□ -1.44
RC3H1Q5TC82 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RC3H1Q5TC82 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RC3H1Q5TC82 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RC3H1Q5TC82 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RC3H1Q5TC82 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
RC3H1Q5TC82 HSPA8P4-201ENST00000511877 1920 ntBASIC6.05□□□□□ -1.44
RC3H1Q5TC82 OR14L1P-202ENST00000641545 3009 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 MAPK10-328ENST00000641553 4009 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RC3H1Q5TC82 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RC3H1Q5TC82 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RC3H1Q5TC82 ZNF137P-201ENST00000456718 1920 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.04□□□□□ -1.44
RC3H1Q5TC82 Y_RNA.16-201ENST00000362421 102 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 RNU6-858P-201ENST00000362436 107 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 Y_RNA.304-201ENST00000365011 112 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 RNU6-708P-201ENST00000384217 107 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 RNU6-790P-201ENST00000384479 105 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 RNU1-82P-201ENST00000390851 165 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 SNORA69.1-201ENST00000390904 137 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 AL356387.2-201ENST00000422272 243 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 RPS27AP12-201ENST00000429552 465 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 BX276092.6-201ENST00000430476 250 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 H2AFZP5-201ENST00000446960 382 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 RPS17P13-201ENST00000448974 407 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 BX276092.8-201ENST00000455722 250 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 RPL21P104-201ENST00000464143 478 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 AC091021.1-201ENST00000468051 388 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 AL049830.2-201ENST00000480072 201 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 COX7A2P2-201ENST00000505291 250 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC6.04□□□□□ -1.44
RC3H1Q5TC82 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.04□□□□□ -1.44
RC3H1Q5TC82 AL359273.1-201ENST00000510918 627 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 AC100870.1-201ENST00000522035 505 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 AC104576.1-201ENST00000524225 88 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC6.04□□□□□ -1.44
RC3H1Q5TC82 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC6.04□□□□□ -1.44
RC3H1Q5TC82 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.04□□□□□ -1.44
RC3H1Q5TC82 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.04□□□□□ -1.44
RC3H1Q5TC82 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RC3H1Q5TC82 AL137003.2-201ENST00000606924 2538 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 SALL4P2-201ENST00000423288 2910 ntBASIC6.04□□□□□ -1.44
RC3H1Q5TC82 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RC3H1Q5TC82 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RC3H1Q5TC82 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RC3H1Q5TC82 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RC3H1Q5TC82 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RC3H1Q5TC82 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RC3H1Q5TC82 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RC3H1Q5TC82 AL080315.1-201ENST00000406055 466 ntBASIC6.03□□□□□ -1.44
RC3H1Q5TC82 RNU2-15P-201ENST00000410692 191 ntBASIC6.03□□□□□ -1.44
RC3H1Q5TC82 AC069218.2-201ENST00000411665 344 ntBASIC6.03□□□□□ -1.44
RC3H1Q5TC82 AL513124.1-201ENST00000450410 614 ntBASIC6.03□□□□□ -1.44
RC3H1Q5TC82 AC239809.1-201ENST00000450470 217 ntBASIC6.03□□□□□ -1.44
RC3H1Q5TC82 ACA59.1-201ENST00000515966 143 ntBASIC6.03□□□□□ -1.44
RC3H1Q5TC82 RNU6-62P-201ENST00000516526 102 ntBASIC6.03□□□□□ -1.44
RC3H1Q5TC82 MTND5P41-201ENST00000517498 206 ntBASIC6.03□□□□□ -1.44
RC3H1Q5TC82 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC6.03□□□□□ -1.44
RC3H1Q5TC82 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.03□□□□□ -1.44
RC3H1Q5TC82 AMZ2P1-203ENST00000565833 850 ntBASIC6.03□□□□□ -1.44
RC3H1Q5TC82 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.03□□□□□ -1.44
RC3H1Q5TC82 AP005019.3-201ENST00000620418 560 ntBASIC6.03□□□□□ -1.44
RC3H1Q5TC82 AP001005.3-201ENST00000622049 129 ntBASIC6.03□□□□□ -1.44
RC3H1Q5TC82 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RC3H1Q5TC82 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RC3H1Q5TC82 AP000560.1-201ENST00000624150 1937 ntBASIC6.03□□□□□ -1.44
RC3H1Q5TC82 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 Y_RNA.458-201ENST00000384240 102 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AC092423.1-201ENST00000430165 186 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 FHP1-201ENST00000442741 703 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AC079168.2-201ENST00000453977 416 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 RPL36AP41-201ENST00000493820 306 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AC007016.1-201ENST00000512110 244 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AC026402.1-201ENST00000513642 170 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AC015795.1-201ENST00000513669 327 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 RNU6-709P-201ENST00000517257 104 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AC018442.3-201ENST00000523025 183 ntBASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.02□□□□□ -1.45
RC3H1Q5TC82 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms