Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 U3.2-201ENST00000362981 210 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 Y_RNA.182-201ENST00000363880 111 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 RN7SKP227-201ENST00000364445 330 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 RNU4-11P-201ENST00000365287 132 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 Y_RNA.570-201ENST00000384750 101 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 MIR551A-201ENST00000385042 96 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 AL009179.1-201ENST00000406085 265 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 RNU2-2P-201ENST00000410396 191 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 AC007161.1-204ENST00000423039 460 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 Z82188.1-201ENST00000436709 154 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 GAPDHP25-201ENST00000447061 1001 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 RN7SL222P-201ENST00000476452 299 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 RPS21P4-201ENST00000487122 248 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 RNU1-86P-201ENST00000516108 154 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 MIR892C-201ENST00000516410 77 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 RNU1-107P-201ENST00000516617 154 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 CR383656.7-201ENST00000548164 174 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 B3GNTL1P2-201ENST00000603673 288 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 RPL23AP88-201ENST00000605759 454 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 RNU2-4P-201ENST00000606190 192 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 U2.15-201ENST00000611544 191 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 U2.16-201ENST00000613119 191 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 U2.12-201ENST00000613778 191 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 U2.9-201ENST00000615427 191 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 MIR6129-201ENST00000616087 109 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 U2.11-201ENST00000616345 191 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 U2.2-201ENST00000616535 191 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 U2.3-201ENST00000617785 191 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 U2.19-201ENST00000618602 191 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 RNU2-1-201ENST00000618664 191 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 U2.6-201ENST00000619225 191 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 U2.5-201ENST00000619465 191 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 U2.10-201ENST00000620268 191 ntBASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RNFT1Q5M7Z0 PHKBP1-201ENST00000450951 1951 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 AL731532.2-201ENST00000623542 1953 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 MIR133B-201ENST00000362210 119 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 SNORA74A-201ENST00000364089 198 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 RNU6-827P-201ENST00000365553 106 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 RNU6-1144P-201ENST00000384247 104 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 RNU6-318P-201ENST00000384283 103 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 Y_RNA.534-201ENST00000384599 112 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 Y_RNA.542-201ENST00000384641 111 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 RNU6-1179P-201ENST00000384667 107 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 RPS4XP3-201ENST00000398541 413 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 RNU2-50P-201ENST00000410494 143 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 RPL7AP73-201ENST00000413490 353 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 AC099677.1-201ENST00000420575 175 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 POLR2KP2-201ENST00000438155 177 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 RANP8-201ENST00000444720 713 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 AC016700.2-201ENST00000446011 156 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 MRPS10P1-201ENST00000448483 130 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 EEF1B2P7-201ENST00000451177 676 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 snoU109.4-201ENST00000458953 143 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 AC090602.1-201ENST00000469695 252 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 AC117440.1-201ENST00000474107 571 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 RN7SL808P-201ENST00000496066 299 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 RAC1P5-201ENST00000512182 576 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 RN7SKP179-201ENST00000516126 217 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 RNU6-168P-201ENST00000516189 101 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 SNORD91B-202ENST00000608459 222 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 MIR7155-201ENST00000615925 56 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 AC004825.2-201ENST00000616634 455 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 AC110491.1-201ENST00000562191 2010 ntBASIC5□□□□□ -1.61
RNFT1Q5M7Z0 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5□□□□□ -1.61
RNFT1Q5M7Z0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms