Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 RNU4-48P-201ENST00000365559 182 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 SNORA32.2-201ENST00000384049 122 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 RNU6-637P-201ENST00000384050 107 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 MIR558-201ENST00000384920 94 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 UBE2FP1-201ENST00000416536 447 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 MTND4LP16-201ENST00000440828 295 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 snoU109.4-201ENST00000458953 143 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AL163973.1-201ENST00000484753 577 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 RPS26P15-201ENST00000488067 348 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 RNU2-10P-201ENST00000516375 211 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 OR5B19P-201ENST00000531766 928 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AC243972.3-201ENST00000539655 198 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 MIR4719-201ENST00000585233 84 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AC006130.2-201ENST00000586202 326 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AC105429.2-201ENST00000610567 517 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 TUG1_1.1-201ENST00000610654 145 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AC112487.2-201ENST00000637950 304 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 AC244517.1-201ENST00000606030 2086 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 HSPA8P1-201ENST00000425843 1833 ntBASIC4.44□□□□□ -1.7
CCDC178Q5BJE1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 Y_RNA.72-201ENST00000362894 103 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 RNU6-767P-201ENST00000384132 107 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 MIR554-201ENST00000384874 96 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 MT-TD-201ENST00000387419 68 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 RNA5SP424-201ENST00000390988 115 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 AL136372.1-201ENST00000403060 228 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 RNU6-373P-201ENST00000411247 98 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 MTATP6P16-201ENST00000434543 526 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 SNORA71B-202ENST00000439232 272 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 AL356535.1-201ENST00000440335 398 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 NOTCH2P1-201ENST00000443481 624 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 CBWD4P-201ENST00000445695 655 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 DDX3P2-201ENST00000446138 111 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 AC007537.2-201ENST00000472093 511 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 AC069499.1-201ENST00000489433 509 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 RPS15AP36-201ENST00000492022 382 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 Y_RNA.675-201ENST00000516389 149 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 HMGN1P28-201ENST00000521340 364 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 SUB1P1-201ENST00000524415 382 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 DEFB108D-201ENST00000527787 222 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 OR5AL2P-201ENST00000532185 920 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 GLYCAM1-201ENST00000546596 285 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 AC018638.8-201ENST00000588755 281 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 HMGB1P50-201ENST00000605814 607 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 AC005858.4-201ENST00000623191 700 ntBASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC178Q5BJE1 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 Y_RNA.142-201ENST00000363491 102 ntBASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 Y_RNA.157-201ENST00000363638 102 ntBASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 Y_RNA.263-201ENST00000364659 114 ntBASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 Y_RNA.529-201ENST00000384586 119 ntBASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 RNU6-606P-201ENST00000384721 111 ntBASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 RNU6-332P-201ENST00000391193 108 ntBASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 AL162578.1-201ENST00000406202 378 ntBASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 RNU2-39P-201ENST00000410604 198 ntBASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 EEF1A1P40-201ENST00000412883 573 ntBASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 AC017083.1-201ENST00000428093 483 ntBASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 AC093106.2-201ENST00000428212 385 ntBASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 RPL36AP53-201ENST00000432891 316 ntBASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 RPL29P29-201ENST00000448725 423 ntBASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 AL356010.1-201ENST00000456364 102 ntBASIC4.42□□□□□ -1.7
CCDC178Q5BJE1 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms