Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MIR6130-201ENST00000619419 109 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 AC008443.7-201ENST00000622195 246 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 AL158801.5-201ENST00000623123 465 ntBASIC2.43□□□□□ -2.02
RFX4Q33E94 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RFX4Q33E94 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
RFX4Q33E94 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.43□□□□□ -2.02
RFX4Q33E94 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
RFX4Q33E94 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 AC087359.1-201ENST00000508335 1740 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RFX4Q33E94 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RFX4Q33E94 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RFX4Q33E94 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RFX4Q33E94 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
RFX4Q33E94 MIR208A-201ENST00000362287 71 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 SNORD113-6-201ENST00000363345 75 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 RNU6-97P-201ENST00000363387 104 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 RNA5SP393-201ENST00000363423 117 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 U8.8-201ENST00000365399 135 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 RNU6-114P-201ENST00000384704 105 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
RFX4Q33E94 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX4Q33E94 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 CCDC58P2-201ENST00000417131 366 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 HMGB1P49-201ENST00000418882 569 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 MTCO2P21-201ENST00000419780 677 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX4Q33E94 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.42□□□□□ -2.02
RFX4Q33E94 AL445669.1-201ENST00000426743 755 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX4Q33E94 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX4Q33E94 SNRPEP7-201ENST00000438350 220 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX4Q33E94 AP000542.1-201ENST00000448473 371 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 CACYBPP2-201ENST00000453625 678 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX4Q33E94 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX4Q33E94 AC021382.1-201ENST00000483523 359 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 FAM172BP-201ENST00000487497 1089 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX4Q33E94 VN1R104P-201ENST00000505115 1009 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 AC026427.2-201ENST00000506228 536 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 AC006445.2-201ENST00000510061 472 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX4Q33E94 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
RFX4Q33E94 AC034159.1-201ENST00000513885 583 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.42□□□□□ -2.02
RFX4Q33E94 RPPH1-2P-201ENST00000516688 293 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 AC103783.1-201ENST00000520506 373 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 CASP1P1-201ENST00000526345 212 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.42□□□□□ -2.02
RFX4Q33E94 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX4Q33E94 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX4Q33E94 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX4Q33E94 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.42□□□□□ -2.02
RFX4Q33E94 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX4Q33E94 AC004987.4-201ENST00000603383 338 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.42□□□□□ -2.02
RFX4Q33E94 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.42□□□□□ -2.02
RFX4Q33E94 AC024560.3-201ENST00000608482 349 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 AC004067.1-201ENST00000608733 700 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 AC090132.2-201ENST00000615881 347 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 AL603758.1-201ENST00000618654 241 ntBASIC2.42□□□□□ -2.02
RFX4Q33E94 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.42□□□□□ -2.02
RFX4Q33E94 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.42□□□□□ -2.02
RFX4Q33E94 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.42□□□□□ -2.02
RFX4Q33E94 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
RFX4Q33E94 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
RFX4Q33E94 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.42□□□□□ -2.02
RFX4Q33E94 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.41□□□□□ -2.02
RFX4Q33E94 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
RFX4Q33E94 AC092447.10-201ENST00000620607 1652 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RFX4Q33E94 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RFX4Q33E94 DEFB108F-201ENST00000344638 222 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 RNU6-931P-201ENST00000363850 107 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 Y_RNA.333-201ENST00000365274 102 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 SNORA36C-201ENST00000384289 132 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 UBA52P6-201ENST00000399822 382 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 AL138827.1-201ENST00000402666 306 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 RPL27AP8-201ENST00000424277 446 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.41□□□□□ -2.02
RFX4Q33E94 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.41□□□□□ -2.02
RFX4Q33E94 AC011816.1-201ENST00000441346 546 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 AL121871.1-201ENST00000443413 436 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.41□□□□□ -2.02
RFX4Q33E94 Z73417.1-201ENST00000447373 778 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 snoU13.22-201ENST00000459428 104 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.41□□□□□ -2.02
RFX4Q33E94 AP000852.1-201ENST00000472460 573 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 AC104563.1-201ENST00000476147 376 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 HSPE1P6-201ENST00000479457 291 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.41□□□□□ -2.02
RFX4Q33E94 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.41□□□□□ -2.02
RFX4Q33E94 HIGD1AP13-201ENST00000509878 289 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 CDC42P4-201ENST00000510507 563 ntBASIC2.41□□□□□ -2.02
RFX4Q33E94 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
RFX4Q33E94 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.41□□□□□ -2.02
RFX4Q33E94 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 265.1 ms