| SSX1 | Q16384 | RNU6-1072P-201 | ENST00000384703 | 107 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | RNU6-443P-201 | ENST00000384780 | 107 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | RNU6-952P-201 | ENST00000391164 | 108 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | CoTC_ribozyme.1-201 | ENST00000408104 | 192 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | UBE2Q2P12-201 | ENST00000414573 | 204 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | MORF4L1P6-201 | ENST00000418771 | 268 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | LINC01676-201 | ENST00000420901 | 410 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | BBIP1-203 | ENST00000423273 | 492 nt | TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL391832.1-201 | ENST00000423963 | 423 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | TTTY8-202 | ENST00000426035 | 518 nt | TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL358075.3-201 | ENST00000426289 | 226 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL691515.1-201 | ENST00000432976 | 733 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC097347.1-201 | ENST00000438499 | 517 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | CYCSP32-201 | ENST00000440548 | 321 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL049734.2-201 | ENST00000441066 | 616 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | CBWD4P-201 | ENST00000445695 | 655 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL451164.2-201 | ENST00000445932 | 597 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | RPL23AP7-203 | ENST00000449021 | 469 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | RPS15AP27-201 | ENST00000449183 | 343 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | LINC01828-202 | ENST00000450294 | 955 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL445465.2-201 | ENST00000455530 | 461 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | TTTY8B-202 | ENST00000455570 | 518 nt | TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | RNU7-136P-201 | ENST00000458819 | 69 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | snoU13.8-201 | ENST00000458890 | 104 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | SNORD109B-201 | ENST00000458961 | 67 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | SNORD109A-201 | ENST00000459128 | 67 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | RPL31P50-201 | ENST00000471002 | 296 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC108734.3-201 | ENST00000481241 | 1165 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC008427.1-201 | ENST00000503102 | 655 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC105389.2-201 | ENST00000506475 | 435 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | MRPS36P2-201 | ENST00000512569 | 299 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | LINC02484-201 | ENST00000513843 | 546 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | SNORA70.24-201 | ENST00000517233 | 118 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AP003781.1-201 | ENST00000543403 | 404 nt | TSL 3 BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC121758.2-201 | ENST00000553271 | 193 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | LINC02253-201 | ENST00000559321 | 448 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC010547.2-201 | ENST00000568523 | 409 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC104072.1-201 | ENST00000568817 | 668 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC126365.2-201 | ENST00000580630 | 379 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC011471.1-201 | ENST00000585766 | 187 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AP001172.2-201 | ENST00000602454 | 467 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC007619.2-201 | ENST00000605743 | 379 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC083798.2-205 | ENST00000608015 | 575 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL445264.1-201 | ENST00000621719 | 171 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC126544.2-201 | ENST00000625174 | 749 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | CDK1-202 | ENST00000373809 | 1613 nt | TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | SCN7A-201 | ENST00000409855 | 7183 nt | APPRIS P1 TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | EYS-202 | ENST00000342421 | 2168 nt | TSL 1 (best) BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL022578.1-201 | ENST00000439330 | 1433 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | SNORA68.1-201 | ENST00000364537 | 132 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | RNU6-217P-201 | ENST00000384164 | 104 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | RNU2-52P-201 | ENST00000410680 | 190 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | RN7SKP140-201 | ENST00000411196 | 284 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL157709.1-201 | ENST00000412695 | 424 nt | TSL 3 BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | OR4K6P-201 | ENST00000416478 | 897 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | PTP4A1P7-201 | ENST00000423476 | 514 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | OR5H14-201 | ENST00000437310 | 1080 nt | APPRIS P1 BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | Z82210.1-201 | ENST00000440037 | 231 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | FGF7P5-201 | ENST00000441829 | 291 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | PIGFP3-201 | ENST00000441918 | 722 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL121970.1-201 | ENST00000447557 | 929 nt | TSL 1 (best) BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | ARPC3P5-201 | ENST00000448802 | 534 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AP1S2P1-201 | ENST00000457344 | 379 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC010273.2-201 | ENST00000479830 | 438 nt | TSL 5 BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC104137.1-201 | ENST00000503625 | 385 nt | TSL 3 BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | SUMO2P6-201 | ENST00000505273 | 288 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC022447.3-201 | ENST00000506865 | 495 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC069306.1-201 | ENST00000507006 | 843 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | LINC02465-201 | ENST00000507099 | 532 nt | TSL 4 BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC010210.1-203 | ENST00000513905 | 260 nt | TSL 3 BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | RNU6-714P-201 | ENST00000516963 | 103 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC092746.1-201 | ENST00000542819 | 562 nt | TSL 4 BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL352955.1-201 | ENST00000555490 | 332 nt | TSL 3 BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL391261.3-201 | ENST00000557194 | 520 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | TRAV28-201 | ENST00000557548 | 323 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | MIR4658-201 | ENST00000584344 | 65 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | BNIP3P33-201 | ENST00000598912 | 569 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC068620.3-201 | ENST00000602749 | 560 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | ATP1B3P1-201 | ENST00000605365 | 821 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL159972.1-201 | ENST00000625150 | 448 nt | BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | P2RY12-201 | ENST00000302632 | 1766 nt | APPRIS P1 TSL 1 (best) BASIC | 2 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | ZBED5-201 | ENST00000413761 | 2512 nt | APPRIS P1 TSL 1 (best) BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC022336.2-201 | ENST00000568966 | 2538 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | CEP57L1-203 | ENST00000368970 | 1680 nt | APPRIS ALT2 TSL 5 BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | RNU6-461P-201 | ENST00000364195 | 107 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | RNA5SP138-201 | ENST00000365098 | 114 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | RNU6-224P-201 | ENST00000384055 | 107 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | TRAV8-1-201 | ENST00000390430 | 473 nt | APPRIS P1 BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL122016.1-201 | ENST00000403365 | 367 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | MRLN-201 | ENST00000414264 | 422 nt | APPRIS P2 TSL 1 (best) BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC003092.1-201 | ENST00000415536 | 639 nt | TSL 3 BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | COTL1P1-201 | ENST00000422309 | 375 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AC098614.2-201 | ENST00000426040 | 255 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | LINC02532-205 | ENST00000430094 | 628 nt | TSL 5 BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | SDR42E1P3-201 | ENST00000438345 | 502 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AP000146.1-202 | ENST00000441666 | 441 nt | TSL 3 BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL591719.1-201 | ENST00000444669 | 744 nt | BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | AL365204.2-201 | ENST00000446754 | 687 nt | TSL 2 BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | MYCBP2-AS1-202 | ENST00000448470 | 333 nt | TSL 3 BASIC | 1.99 | □□□□□ -2.09 | | |
| SSX1 | Q16384 | BX322784.1-201 | ENST00000455793 | 1077 nt | BASIC | 1.99 | □□□□□ -2.09 | | |