Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 RNA5SP239-201ENST00000410218 129 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 RNU2-39P-201ENST00000410604 198 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.84□□□□□ -1.79
E2F1Q01094 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.84□□□□□ -1.79
E2F1Q01094 RPL36AP53-201ENST00000432891 316 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 TBCAP1-201ENST00000436520 327 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.84□□□□□ -1.79
E2F1Q01094 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.84□□□□□ -1.79
E2F1Q01094 AC006512.1-201ENST00000468816 291 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 PPIAP15-201ENST00000479662 484 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 RPS15AP36-201ENST00000492022 382 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 NIPA2P2-201ENST00000496376 1083 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 AC026726.1-201ENST00000512859 601 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 LRRC34P2-201ENST00000514850 553 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 RNU7-143P-201ENST00000516781 65 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 AC100870.1-201ENST00000522035 505 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 OR5B19P-201ENST00000531766 928 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 RAB11AP2-201ENST00000545905 639 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.84□□□□□ -1.79
E2F1Q01094 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.84□□□□□ -1.79
E2F1Q01094 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.84□□□□□ -1.79
E2F1Q01094 AL117336.2-201ENST00000602435 335 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 AL161756.2-201ENST00000604597 246 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 AC007179.3-201ENST00000604976 235 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 AC091167.4-201ENST00000605079 184 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 AC022140.2-201ENST00000623500 188 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 AC093648.1-201ENST00000623546 606 ntBASIC3.84□□□□□ -1.79
E2F1Q01094 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.84□□□□□ -1.79
E2F1Q01094 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
E2F1Q01094 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.84□□□□□ -1.79
E2F1Q01094 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
E2F1Q01094 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.84□□□□□ -1.79
E2F1Q01094 RIOK3P1-201ENST00000418778 1528 ntBASIC3.84□□□□□ -1.8
E2F1Q01094 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
E2F1Q01094 MTND5P3-201ENST00000438536 1800 ntBASIC3.84□□□□□ -1.8
E2F1Q01094 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.83□□□□□ -1.8
E2F1Q01094 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.83□□□□□ -1.8
E2F1Q01094 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
E2F1Q01094 RNU6-641P-201ENST00000384006 107 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 MIR483-201ENST00000385070 76 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 RPL21P17-201ENST00000397467 475 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 RNA5SP306-201ENST00000411087 107 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.83□□□□□ -1.8
E2F1Q01094 RPS12P23-201ENST00000419579 400 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 MTND4P28-201ENST00000426217 387 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 AL162389.1-201ENST00000449233 177 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.83□□□□□ -1.8
E2F1Q01094 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.83□□□□□ -1.8
E2F1Q01094 MRPS17P3-201ENST00000465453 385 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 RN7SL585P-201ENST00000470538 280 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.83□□□□□ -1.8
E2F1Q01094 AC116562.3-201ENST00000506136 177 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.83□□□□□ -1.8
E2F1Q01094 AC068587.5-201ENST00000528506 175 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 AC126177.3-201ENST00000551839 688 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.83□□□□□ -1.8
E2F1Q01094 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.83□□□□□ -1.8
E2F1Q01094 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.83□□□□□ -1.8
E2F1Q01094 MIR4719-201ENST00000585233 84 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.83□□□□□ -1.8
E2F1Q01094 AC005261.5-201ENST00000596280 355 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 HMGB1P50-201ENST00000605814 607 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 RNA5SP108-201ENST00000605921 117 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.83□□□□□ -1.8
E2F1Q01094 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.83□□□□□ -1.8
E2F1Q01094 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
E2F1Q01094 MTND5P17-201ENST00000418405 1603 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
E2F1Q01094 AC018555.1-201ENST00000567548 1980 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 AC004972.1-201ENST00000623934 2209 ntBASIC3.83□□□□□ -1.8
E2F1Q01094 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
E2F1Q01094 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
E2F1Q01094 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
E2F1Q01094 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.82□□□□□ -1.8
E2F1Q01094 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
E2F1Q01094 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
E2F1Q01094 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
E2F1Q01094 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
E2F1Q01094 RNU6-1284P-201ENST00000363701 100 ntBASIC3.82□□□□□ -1.8
E2F1Q01094 RNA5SP72-201ENST00000364442 117 ntBASIC3.82□□□□□ -1.8
E2F1Q01094 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
E2F1Q01094 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
E2F1Q01094 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.82□□□□□ -1.8
E2F1Q01094 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.82□□□□□ -1.8
E2F1Q01094 UBE2FP1-201ENST00000416536 447 ntBASIC3.82□□□□□ -1.8
E2F1Q01094 MTCYBP8-201ENST00000422855 651 ntBASIC3.82□□□□□ -1.8
E2F1Q01094 AC091286.1-201ENST00000431233 461 ntBASIC3.82□□□□□ -1.8
E2F1Q01094 ATP5JP1-201ENST00000431631 322 ntBASIC3.82□□□□□ -1.8
E2F1Q01094 RPL36AP6-201ENST00000435770 321 ntBASIC3.82□□□□□ -1.8
E2F1Q01094 HMGB3P22-202ENST00000451823 572 ntBASIC3.82□□□□□ -1.8
E2F1Q01094 SNORD97-201ENST00000459187 142 ntBASIC3.82□□□□□ -1.8
E2F1Q01094 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.82□□□□□ -1.8
E2F1Q01094 AP000926.1-201ENST00000479573 241 ntBASIC3.82□□□□□ -1.8
E2F1Q01094 RPL38P4-201ENST00000502376 214 ntBASIC3.82□□□□□ -1.8
E2F1Q01094 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.82□□□□□ -1.8
E2F1Q01094 AC026427.2-201ENST00000506228 536 ntBASIC3.82□□□□□ -1.8
E2F1Q01094 AC017037.1-201ENST00000508460 471 ntBASIC3.82□□□□□ -1.8
E2F1Q01094 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.82□□□□□ -1.8
E2F1Q01094 AC010486.1-201ENST00000511793 424 ntBASIC3.82□□□□□ -1.8
E2F1Q01094 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms