Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU6-108P-201ENST00000365558 107 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 RNU6-641P-201ENST00000384006 107 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 RNU6-14P-201ENST00000384630 106 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 RNA5SP424-201ENST00000390988 115 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 SNORA57.1-201ENST00000391227 145 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CX3CL1P78423 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 AL590704.1-201ENST00000402856 794 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CX3CL1P78423 AL139397.2-201ENST00000404529 772 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 MIR1193-201ENST00000408109 78 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.98□□□□□ -1.93
CX3CL1P78423 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.98□□□□□ -1.93
CX3CL1P78423 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.98□□□□□ -1.93
CX3CL1P78423 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.98□□□□□ -1.93
CX3CL1P78423 NEFMP1-201ENST00000443423 1006 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 AC132479.1-201ENST00000449160 144 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 HMGB3P8-201ENST00000449709 577 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.98□□□□□ -1.93
CX3CL1P78423 AL049830.2-201ENST00000480072 201 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 AC007182.2-201ENST00000489251 402 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.98□□□□□ -1.93
CX3CL1P78423 HMGB1P29-201ENST00000505659 499 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.98□□□□□ -1.93
CX3CL1P78423 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.98□□□□□ -1.93
CX3CL1P78423 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.98□□□□□ -1.93
CX3CL1P78423 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.98□□□□□ -1.93
CX3CL1P78423 EIF1P4-201ENST00000572664 335 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 MIR4738-201ENST00000579134 87 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 AC098848.2-201ENST00000588023 330 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 AC007363.1-201ENST00000604736 620 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 AC079684.1-201ENST00000621405 437 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.98□□□□□ -1.93
CX3CL1P78423 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CX3CL1P78423 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.98□□□□□ -1.93
CX3CL1P78423 AP001148.1-201ENST00000624124 2359 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CX3CL1P78423 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CX3CL1P78423 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CX3CL1P78423 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CX3CL1P78423 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
CX3CL1P78423 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CX3CL1P78423 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CX3CL1P78423 AF117829.1-206ENST00000621883 3802 ntBASIC2.98□□□□□ -1.93
CX3CL1P78423 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.98□□□□□ -1.93
CX3CL1P78423 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CX3CL1P78423 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CX3CL1P78423 AC007785.2-201ENST00000598627 1916 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 AC118273.1-201ENST00000525324 3006 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CX3CL1P78423 RN7SKP280-201ENST00000364196 304 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 Y_RNA.367-201ENST00000365544 101 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CX3CL1P78423 RNU6-946P-201ENST00000383878 107 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 RNU6-456P-201ENST00000384493 107 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 MIR325-201ENST00000385260 98 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 RPL32P23-201ENST00000397237 405 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CX3CL1P78423 RN7SKP156-201ENST00000410308 342 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 RNU2-33P-201ENST00000410344 192 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 RNU2-39P-201ENST00000410604 198 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 SNORA57.3-201ENST00000411095 141 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 TMEM167AP1-201ENST00000423409 219 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 AC007919.1-201ENST00000429380 217 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 AC073464.1-201ENST00000429823 534 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 RPS20P5-201ENST00000434808 360 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.97□□□□□ -1.93
CX3CL1P78423 AC079781.2-201ENST00000446424 169 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.97□□□□□ -1.93
CX3CL1P78423 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.97□□□□□ -1.93
CX3CL1P78423 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CX3CL1P78423 AC013267.1-201ENST00000458227 267 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.97□□□□□ -1.93
CX3CL1P78423 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.97□□□□□ -1.93
CX3CL1P78423 AL135752.1-201ENST00000479477 471 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 AC010493.1-201ENST00000513479 292 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.97□□□□□ -1.93
CX3CL1P78423 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.97□□□□□ -1.93
CX3CL1P78423 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.97□□□□□ -1.93
CX3CL1P78423 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.97□□□□□ -1.93
CX3CL1P78423 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.97□□□□□ -1.93
CX3CL1P78423 MIR3186-201ENST00000577404 85 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC2.97□□□□□ -1.93
CX3CL1P78423 AC087499.8-201ENST00000578406 226 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.97□□□□□ -1.93
CX3CL1P78423 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.97□□□□□ -1.93
CX3CL1P78423 AC008962.1-201ENST00000605729 304 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.97□□□□□ -1.93
CX3CL1P78423 AC122108.2-201ENST00000611946 526 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 AC002076.2-201ENST00000617362 122 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CX3CL1P78423 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.97□□□□□ -1.93
CX3CL1P78423 AC092628.2-201ENST00000622492 339 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.97□□□□□ -1.93
CX3CL1P78423 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
CX3CL1P78423 MIR7153-201ENST00000637758 57 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CX3CL1P78423 AL137003.2-201ENST00000606924 2538 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
CX3CL1P78423 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms