Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 Z82217.1-201ENST00000625157 8149 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 RNU1-15P-201ENST00000353977 144 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 MIR369-201ENST00000362155 70 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 Y_RNA.212-201ENST00000364177 102 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 RNA5SP505-201ENST00000364748 108 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 RNU6-434P-201ENST00000384376 107 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CLRN1P58418 RNY4P36-201ENST00000391116 96 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 HSPE1P8-201ENST00000406997 288 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 RNU6-370P-201ENST00000411008 104 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.89□□□□□ -1.79
CLRN1P58418 AL160275.3-201ENST00000423876 471 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 FAR2P4-202ENST00000425399 584 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 AL591704.1-201ENST00000432574 275 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.89□□□□□ -1.79
CLRN1P58418 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.89□□□□□ -1.79
CLRN1P58418 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLRN1P58418 AL162388.1-201ENST00000450912 352 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 RNU7-167P-201ENST00000459160 62 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 SNORD108-201ENST00000459332 71 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 RPL35AP15-201ENST00000468042 339 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.89□□□□□ -1.79
CLRN1P58418 HMGB3P15-201ENST00000507326 574 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 AC005741.1-201ENST00000511094 432 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 SNORA31.20-201ENST00000517111 133 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.89□□□□□ -1.79
CLRN1P58418 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.89□□□□□ -1.79
CLRN1P58418 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.89□□□□□ -1.79
CLRN1P58418 FAM60BP-201ENST00000578364 658 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.89□□□□□ -1.79
CLRN1P58418 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.89□□□□□ -1.79
CLRN1P58418 RN7SL52P-201ENST00000584271 284 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 AC023043.2-201ENST00000589678 1026 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 BDH2P1-201ENST00000602288 736 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 AC080078.3-201ENST00000605407 463 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CLRN1P58418 MIR6891-201ENST00000618788 93 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLRN1P58418 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.89□□□□□ -1.79
CLRN1P58418 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.89□□□□□ -1.79
CLRN1P58418 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 MTND4P27-201ENST00000450813 1354 ntBASIC3.89□□□□□ -1.79
CLRN1P58418 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLRN1P58418 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CLRN1P58418 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLRN1P58418 AC025031.4-201ENST00000621248 3271 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 RNA5SP175-201ENST00000364275 119 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 RNVU1-6-201ENST00000364688 164 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 SNORD42.2-201ENST00000365570 69 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 SNORD116-11-201ENST00000383882 92 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 RNU6-474P-201ENST00000384243 107 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 MIR937-201ENST00000401271 86 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 AL445189.1-201ENST00000405722 338 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 RPS4XP7-201ENST00000406274 780 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 MIR548P-201ENST00000408336 84 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.88□□□□□ -1.79
CLRN1P58418 RPS12P24-201ENST00000412619 387 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 TMSB10P2-201ENST00000416049 131 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 RPL7P10-201ENST00000417407 739 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 BTF3L4P3-201ENST00000418879 476 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 AL139396.1-201ENST00000421137 167 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.88□□□□□ -1.79
CLRN1P58418 RPEP3-201ENST00000425462 676 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.88□□□□□ -1.79
CLRN1P58418 FABP5P14-201ENST00000437273 393 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 AC073587.1-201ENST00000447093 876 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.88□□□□□ -1.79
CLRN1P58418 RPS26P28-201ENST00000470806 348 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 AC110792.1-201ENST00000491826 472 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 RPS27P27-201ENST00000498779 255 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.88□□□□□ -1.79
CLRN1P58418 SNORA14.1-201ENST00000516113 141 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.88□□□□□ -1.79
CLRN1P58418 TRMT10BP1-201ENST00000519377 943 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.88□□□□□ -1.79
CLRN1P58418 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.88□□□□□ -1.79
CLRN1P58418 APOOP3-201ENST00000536787 586 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 AL355836.1-201ENST00000555951 870 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 AC007151.1-201ENST00000572774 483 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 MIR3941-201ENST00000582572 103 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 MIR3171-201ENST00000584270 74 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 AC079587.1-201ENST00000603846 277 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 AC124303.1-201ENST00000605703 360 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 AL138726.1-201ENST00000614873 333 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 AC008013.2-202ENST00000637965 364 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLRN1P58418 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLRN1P58418 AP001273.1-201ENST00000624493 3152 ntBASIC3.88□□□□□ -1.79
CLRN1P58418 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLRN1P58418 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLRN1P58418 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.87□□□□□ -1.79
CLRN1P58418 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CLRN1P58418 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.87□□□□□ -1.79
CLRN1P58418 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
CLRN1P58418 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
CLRN1P58418 OR5P1P-201ENST00000299512 925 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 Y_RNA.128-201ENST00000363391 112 ntBASIC3.87□□□□□ -1.79
CLRN1P58418 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms