Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.26□□□□□ -1.89
CLDN20P56880 RPS3AP44-201ENST00000425466 790 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN20P56880 MTCO2P11-201ENST00000431069 680 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 USP12PX-201ENST00000432383 1057 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 HSPD1P21-201ENST00000436541 245 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 VN1R34P-201ENST00000447387 883 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 AC132479.1-201ENST00000449160 144 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 RPS4XP2-201ENST00000458402 793 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 RPS27P29-201ENST00000463110 252 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 SRRM1P2-201ENST00000464531 1192 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 VN1R17P-201ENST00000472048 1090 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.26□□□□□ -1.89
CLDN20P56880 HSPE1P6-201ENST00000479457 291 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 RPL9P6-201ENST00000492764 598 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN20P56880 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.26□□□□□ -1.89
CLDN20P56880 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN20P56880 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN20P56880 RNU6-445P-201ENST00000516949 107 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 RANP9-201ENST00000519957 271 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 FAM60DP-201ENST00000524174 632 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.26□□□□□ -1.89
CLDN20P56880 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN20P56880 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.26□□□□□ -1.89
CLDN20P56880 MIR4444-1-201ENST00000581696 74 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 MIR4444-2-201ENST00000584390 74 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 AC105224.1-201ENST00000587055 421 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN20P56880 AC010591.1-201ENST00000603941 649 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 SNORA51-201ENST00000606420 132 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 FRG1KP-201ENST00000623592 341 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CLDN20P56880 LRRC77P-213ENST00000637727 880 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 AC009093.8-201ENST00000641769 292 ntBASIC3.26□□□□□ -1.89
CLDN20P56880 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.26□□□□□ -1.89
CLDN20P56880 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN20P56880 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CLDN20P56880 AC007656.2-201ENST00000624902 4547 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN20P56880 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
CLDN20P56880 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN20P56880 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN20P56880 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN20P56880 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN20P56880 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN20P56880 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN20P56880 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN20P56880 RNU5A-1-201ENST00000362698 116 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 RNU6-282P-201ENST00000365357 103 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 RNU6-805P-201ENST00000365643 106 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 RNU6-1103P-201ENST00000384150 107 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 SNORA36C-201ENST00000384289 132 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 AL359634.1-202ENST00000404721 284 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 RNU6-648P-201ENST00000410190 107 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN20P56880 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN20P56880 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.25□□□□□ -1.89
CLDN20P56880 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN20P56880 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN20P56880 FCF1P1-201ENST00000432690 571 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 MTND3P21-201ENST00000433774 331 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN20P56880 CYCSP43-201ENST00000438233 310 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 AC140076.1-201ENST00000449897 361 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.25□□□□□ -1.89
CLDN20P56880 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.25□□□□□ -1.89
CLDN20P56880 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN20P56880 SNORD97-201ENST00000459187 142 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 RPL21P104-201ENST00000464143 478 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 AC010631.1-201ENST00000474150 156 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN20P56880 AC106707.2-201ENST00000484182 374 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN20P56880 RNU6-506P-201ENST00000516553 94 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 SNORA70.18-201ENST00000516696 98 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 RN7SKP289-201ENST00000517244 295 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 AC093331.1-201ENST00000521474 169 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN20P56880 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.25□□□□□ -1.89
CLDN20P56880 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN20P56880 AC093012.1-202ENST00000549403 582 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 RPL21P12-201ENST00000559810 515 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 AC037471.2-201ENST00000564941 598 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.25□□□□□ -1.89
CLDN20P56880 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN20P56880 MIR3922-201ENST00000585192 84 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 MIR92B-201ENST00000607575 96 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 AC004696.1-201ENST00000614345 607 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 AC068792.1-201ENST00000621354 417 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 AC244100.1-202ENST00000621554 382 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN20P56880 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.25□□□□□ -1.89
CLDN20P56880 SDAD1P2-201ENST00000441308 2028 ntBASIC3.25□□□□□ -1.89
CLDN20P56880 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.25□□□□□ -1.89
CLDN20P56880 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN20P56880 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN20P56880 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CLDN20P56880 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms