Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC245884.12-201ENST00000615364 59 ntBASIC1.5□□□□□ -2.17
CLTCL1P53675 AL591704.2-201ENST00000421658 181 ntBASIC1.49□□□□□ -2.17
CLTCL1P53675 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC1.49□□□□□ -2.17
CLTCL1P53675 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.49□□□□□ -2.17
CLTCL1P53675 GPM6BP3-201ENST00000442797 145 ntBASIC1.49□□□□□ -2.17
CLTCL1P53675 AC105252.1-201ENST00000503089 286 ntBASIC1.49□□□□□ -2.17
CLTCL1P53675 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.49□□□□□ -2.17
CLTCL1P53675 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.49□□□□□ -2.17
CLTCL1P53675 NDUFS5P6-201ENST00000529136 295 ntBASIC1.49□□□□□ -2.17
CLTCL1P53675 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.49□□□□□ -2.17
CLTCL1P53675 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.49□□□□□ -2.17
CLTCL1P53675 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.49□□□□□ -2.17
CLTCL1P53675 SNORD114-21-201ENST00000606412 72 ntBASIC1.49□□□□□ -2.17
CLTCL1P53675 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.48□□□□□ -2.17
CLTCL1P53675 AC020699.1-201ENST00000505161 445 ntBASIC1.48□□□□□ -2.17
CLTCL1P53675 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.48□□□□□ -2.17
CLTCL1P53675 SYF2P1-201ENST00000550658 413 ntBASIC1.48□□□□□ -2.17
CLTCL1P53675 HMGB1P24-202ENST00000615653 685 ntBASIC1.48□□□□□ -2.17
CLTCL1P53675 AL445493.3-201ENST00000619568 477 ntBASIC1.48□□□□□ -2.17
CLTCL1P53675 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.48□□□□□ -2.17
CLTCL1P53675 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CLTCL1P53675 AC111188.2-201ENST00000529697 1387 ntBASIC1.48□□□□□ -2.17
CLTCL1P53675 MTCO3P46-201ENST00000425787 232 ntBASIC1.48□□□□□ -2.17
CLTCL1P53675 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.48□□□□□ -2.17
CLTCL1P53675 HMGN2P10-201ENST00000448085 265 ntBASIC1.48□□□□□ -2.17
CLTCL1P53675 PSPHP1-201ENST00000450062 261 ntBASIC1.48□□□□□ -2.17
CLTCL1P53675 GLYCAM1-201ENST00000546596 285 ntBASIC1.48□□□□□ -2.17
CLTCL1P53675 AL121821.2-201ENST00000556081 394 ntBASIC1.48□□□□□ -2.17
CLTCL1P53675 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.48□□□□□ -2.17
CLTCL1P53675 MIR4458-201ENST00000578872 75 ntBASIC1.48□□□□□ -2.17
CLTCL1P53675 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.48□□□□□ -2.17
CLTCL1P53675 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CLTCL1P53675 RNU4-42P-201ENST00000364738 142 ntBASIC1.47□□□□□ -2.17
CLTCL1P53675 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.47□□□□□ -2.17
CLTCL1P53675 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.47□□□□□ -2.17
CLTCL1P53675 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.47□□□□□ -2.17
CLTCL1P53675 AL139109.1-201ENST00000455491 297 ntBASIC1.47□□□□□ -2.17
CLTCL1P53675 SNORD108-201ENST00000459332 71 ntBASIC1.47□□□□□ -2.17
CLTCL1P53675 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.47□□□□□ -2.17
CLTCL1P53675 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.47□□□□□ -2.17
CLTCL1P53675 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.47□□□□□ -2.17
CLTCL1P53675 MIR5000-201ENST00000577717 103 ntBASIC1.47□□□□□ -2.17
CLTCL1P53675 AC008749.1-201ENST00000597650 306 ntBASIC1.47□□□□□ -2.17
CLTCL1P53675 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.47□□□□□ -2.17
CLTCL1P53675 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.47□□□□□ -2.17
CLTCL1P53675 AC091812.1-201ENST00000432235 1948 ntBASIC1.47□□□□□ -2.17
CLTCL1P53675 DDX43P2-201ENST00000604753 1354 ntBASIC1.46□□□□□ -2.18
CLTCL1P53675 MIR17-201ENST00000385012 84 ntBASIC1.46□□□□□ -2.18
CLTCL1P53675 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.46□□□□□ -2.18
CLTCL1P53675 ARF4P4-201ENST00000439608 520 ntBASIC1.46□□□□□ -2.18
CLTCL1P53675 RPS27P1-201ENST00000450552 247 ntBASIC1.46□□□□□ -2.18
CLTCL1P53675 HSPE1P24-201ENST00000450782 238 ntBASIC1.46□□□□□ -2.18
CLTCL1P53675 SSXP4-201ENST00000451349 245 ntBASIC1.46□□□□□ -2.18
CLTCL1P53675 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.46□□□□□ -2.18
CLTCL1P53675 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.46□□□□□ -2.18
CLTCL1P53675 MIR4295-201ENST00000585286 85 ntBASIC1.46□□□□□ -2.18
CLTCL1P53675 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
CLTCL1P53675 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CLTCL1P53675 RNU6-1320P-201ENST00000390838 107 ntBASIC1.45□□□□□ -2.18
CLTCL1P53675 RNU6-1269P-201ENST00000391139 107 ntBASIC1.45□□□□□ -2.18
CLTCL1P53675 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.45□□□□□ -2.18
CLTCL1P53675 TRIM60P13-201ENST00000432350 1283 ntBASIC1.45□□□□□ -2.18
CLTCL1P53675 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.45□□□□□ -2.18
CLTCL1P53675 GDI2P2-201ENST00000445131 608 ntBASIC1.45□□□□□ -2.18
CLTCL1P53675 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC1.45□□□□□ -2.18
CLTCL1P53675 RNU6-599P-201ENST00000459383 107 ntBASIC1.45□□□□□ -2.18
CLTCL1P53675 RNU6-1193P-201ENST00000459461 107 ntBASIC1.45□□□□□ -2.18
CLTCL1P53675 AC108706.1-201ENST00000611053 297 ntBASIC1.45□□□□□ -2.18
CLTCL1P53675 RNU6-368P-201ENST00000620928 107 ntBASIC1.45□□□□□ -2.18
CLTCL1P53675 RNU6-538P-201ENST00000622329 107 ntBASIC1.45□□□□□ -2.18
CLTCL1P53675 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.45□□□□□ -2.18
CLTCL1P53675 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CLTCL1P53675 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CLTCL1P53675 Y_RNA.393-201ENST00000383936 102 ntBASIC1.44□□□□□ -2.18
CLTCL1P53675 AIMP1P2-201ENST00000425294 312 ntBASIC1.44□□□□□ -2.18
CLTCL1P53675 AL445687.1-201ENST00000439946 251 ntBASIC1.44□□□□□ -2.18
CLTCL1P53675 RPL31P58-201ENST00000469001 379 ntBASIC1.44□□□□□ -2.18
CLTCL1P53675 RNA5SP436-201ENST00000516020 115 ntBASIC1.44□□□□□ -2.18
CLTCL1P53675 RNU6-711P-201ENST00000517255 106 ntBASIC1.44□□□□□ -2.18
CLTCL1P53675 MIR3973-201ENST00000579824 107 ntBASIC1.44□□□□□ -2.18
CLTCL1P53675 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.44□□□□□ -2.18
CLTCL1P53675 AC090953.1-201ENST00000604305 1092 ntBASIC1.44□□□□□ -2.18
CLTCL1P53675 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.44□□□□□ -2.18
CLTCL1P53675 MIR532-201ENST00000385025 91 ntBASIC1.44□□□□□ -2.18
CLTCL1P53675 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CLTCL1P53675 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.44□□□□□ -2.18
CLTCL1P53675 RPS26P56-201ENST00000444468 240 ntBASIC1.44□□□□□ -2.18
CLTCL1P53675 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.44□□□□□ -2.18
CLTCL1P53675 SNORA31.16-201ENST00000516773 139 ntBASIC1.44□□□□□ -2.18
CLTCL1P53675 SUB1P4-201ENST00000566062 339 ntBASIC1.44□□□□□ -2.18
CLTCL1P53675 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.44□□□□□ -2.18
CLTCL1P53675 XKRY2-202ENST00000623874 1581 ntBASIC1.44□□□□□ -2.18
CLTCL1P53675 XKRY-202ENST00000624960 1581 ntBASIC1.44□□□□□ -2.18
CLTCL1P53675 RNU6-1181P-201ENST00000384191 106 ntBASIC1.43□□□□□ -2.18
CLTCL1P53675 RNY1P4-201ENST00000384595 115 ntBASIC1.43□□□□□ -2.18
CLTCL1P53675 CISD1P1-201ENST00000393907 327 ntBASIC1.43□□□□□ -2.18
CLTCL1P53675 AP002784.2-201ENST00000397300 549 ntBASIC1.43□□□□□ -2.18
CLTCL1P53675 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.43□□□□□ -2.18
CLTCL1P53675 AC096751.1-202ENST00000502691 1067 ntBASIC1.43□□□□□ -2.18
CLTCL1P53675 RNA5SP384-201ENST00000516615 116 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 159.7 ms