Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
GTF2A1P52655 RNU1-148P-201ENST00000384472 162 ntBASIC1.66□□□□□ -2.14
GTF2A1P52655 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.66□□□□□ -2.14
GTF2A1P52655 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.66□□□□□ -2.14
GTF2A1P52655 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.66□□□□□ -2.14
GTF2A1P52655 AL445646.1-201ENST00000431784 216 ntBASIC1.66□□□□□ -2.14
GTF2A1P52655 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.66□□□□□ -2.14
GTF2A1P52655 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.66□□□□□ -2.14
GTF2A1P52655 AC068135.1-201ENST00000446164 246 ntBASIC1.66□□□□□ -2.14
GTF2A1P52655 AC015724.1-201ENST00000478577 156 ntBASIC1.66□□□□□ -2.14
GTF2A1P52655 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
GTF2A1P52655 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
GTF2A1P52655 AL359273.1-201ENST00000510918 627 ntBASIC1.66□□□□□ -2.14
GTF2A1P52655 AC008834.1-201ENST00000511612 175 ntBASIC1.66□□□□□ -2.14
GTF2A1P52655 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
GTF2A1P52655 RNU6-491P-201ENST00000516099 110 ntBASIC1.66□□□□□ -2.14
GTF2A1P52655 SNORA48.10-201ENST00000516965 160 ntBASIC1.66□□□□□ -2.14
GTF2A1P52655 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.66□□□□□ -2.14
GTF2A1P52655 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.66□□□□□ -2.14
GTF2A1P52655 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.66□□□□□ -2.14
GTF2A1P52655 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.66□□□□□ -2.14
GTF2A1P52655 AC068944.2-201ENST00000610373 403 ntBASIC1.66□□□□□ -2.14
GTF2A1P52655 uc_338.5-201ENST00000611839 155 ntBASIC1.66□□□□□ -2.14
GTF2A1P52655 AL592148.2-201ENST00000612210 372 ntBASIC1.66□□□□□ -2.14
GTF2A1P52655 AC068722.2-201ENST00000618734 544 ntBASIC1.66□□□□□ -2.14
GTF2A1P52655 AC068057.2-201ENST00000624047 895 ntBASIC1.66□□□□□ -2.14
GTF2A1P52655 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.66□□□□□ -2.14
GTF2A1P52655 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
GTF2A1P52655 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
GTF2A1P52655 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
GTF2A1P52655 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
GTF2A1P52655 RNA5SP276-201ENST00000362580 94 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 RNU1-62P-201ENST00000362599 164 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 RNA5SP125-201ENST00000364843 120 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 MIR325-201ENST00000385260 98 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
GTF2A1P52655 U3.26-201ENST00000391236 204 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 SNORA11-201ENST00000408789 128 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.65□□□□□ -2.15
GTF2A1P52655 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.65□□□□□ -2.15
GTF2A1P52655 DNAJC19P4-201ENST00000440115 345 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.65□□□□□ -2.15
GTF2A1P52655 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.65□□□□□ -2.15
GTF2A1P52655 AC118469.1-201ENST00000442943 488 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 RAC1P7-201ENST00000445367 377 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 AC009237.8-201ENST00000445492 379 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 HSPE1P6-201ENST00000479457 291 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.65□□□□□ -2.15
GTF2A1P52655 AP000926.3-201ENST00000497201 299 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.65□□□□□ -2.15
GTF2A1P52655 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.65□□□□□ -2.15
GTF2A1P52655 AP005435.4-201ENST00000529514 284 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 AC118273.2-201ENST00000532092 465 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.65□□□□□ -2.15
GTF2A1P52655 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.65□□□□□ -2.15
GTF2A1P52655 EEF1B2P4-201ENST00000551398 348 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.65□□□□□ -2.15
GTF2A1P52655 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.65□□□□□ -2.15
GTF2A1P52655 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.65□□□□□ -2.15
GTF2A1P52655 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.65□□□□□ -2.15
GTF2A1P52655 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.65□□□□□ -2.15
GTF2A1P52655 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.65□□□□□ -2.15
GTF2A1P52655 BNIP3P33-201ENST00000598912 569 ntBASIC1.65□□□□□ -2.15
GTF2A1P52655 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
GTF2A1P52655 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
GTF2A1P52655 MIR126-201ENST00000362291 85 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 SNORD82-201ENST00000365530 70 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 OR9R1P-201ENST00000412200 877 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 USP9YP6-201ENST00000413550 854 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 AL158823.1-201ENST00000418441 478 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.64□□□□□ -2.15
GTF2A1P52655 AC096920.1-201ENST00000423991 241 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.64□□□□□ -2.15
GTF2A1P52655 AC093106.2-201ENST00000428212 385 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.64□□□□□ -2.15
GTF2A1P52655 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.64□□□□□ -2.15
GTF2A1P52655 AL592447.1-201ENST00000447592 540 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.64□□□□□ -2.15
GTF2A1P52655 VPS26AP1-201ENST00000483197 979 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
GTF2A1P52655 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.64□□□□□ -2.15
GTF2A1P52655 AC010186.2-204ENST00000537668 439 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 AC084033.1-201ENST00000550830 633 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.64□□□□□ -2.15
GTF2A1P52655 AL160236.1-201ENST00000556317 195 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 AC009063.1-201ENST00000563342 702 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.64□□□□□ -2.15
GTF2A1P52655 AC106734.1-201ENST00000568646 663 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 MIR3199-1-201ENST00000582434 88 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.64□□□□□ -2.15
GTF2A1P52655 AL160281.1-201ENST00000605307 311 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 AC093838.1-201ENST00000613014 469 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 MIR219B-201ENST00000637023 88 ntBASIC1.64□□□□□ -2.15
GTF2A1P52655 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
GTF2A1P52655 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
GTF2A1P52655 USP9YP15-201ENST00000442391 422 ntBASIC1.63□□□□□ -2.15
GTF2A1P52655 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.63□□□□□ -2.15
GTF2A1P52655 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.63□□□□□ -2.15
GTF2A1P52655 RPL9P6-201ENST00000492764 598 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms