Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.35□□□□□ -2.03
CX3CR1P49238 AC114786.4-201ENST00000508771 728 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.35□□□□□ -2.03
CX3CR1P49238 AC114797.1-201ENST00000514003 728 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 RNA5SP291-201ENST00000517222 105 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
CX3CR1P49238 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.35□□□□□ -2.03
CX3CR1P49238 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.35□□□□□ -2.03
CX3CR1P49238 AC007954.1-201ENST00000554198 494 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 AL049838.1-201ENST00000563647 981 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 CYCSP39-201ENST00000565821 309 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 AC025281.1-201ENST00000567026 265 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 AC138761.3-201ENST00000579993 334 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 AC021749.1-201ENST00000604322 607 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 MTND4LP5-201ENST00000605152 292 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 AL139344.1-201ENST00000605228 195 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.35□□□□□ -2.03
CX3CR1P49238 AC093732.2-201ENST00000607950 274 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.35□□□□□ -2.03
CX3CR1P49238 AL078595.3-201ENST00000623815 1166 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 AC010297.1-201ENST00000623948 149 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 AC019226.1-201ENST00000625666 515 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 AC116618.1-201ENST00000634617 774 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 MTND1P37-201ENST00000636562 264 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.35□□□□□ -2.03
CX3CR1P49238 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CX3CR1P49238 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CX3CR1P49238 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.34□□□□□ -2.03
CX3CR1P49238 CCT4P2-201ENST00000233836 1548 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CX3CR1P49238 MIR6073-201ENST00000352083 89 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 VTRNA1-1-201ENST00000363120 99 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 AL139095.1-201ENST00000404326 391 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 RNA5SP21-201ENST00000410917 96 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 RNU6-516P-201ENST00000411381 104 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.34□□□□□ -2.03
CX3CR1P49238 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.34□□□□□ -2.03
CX3CR1P49238 AC098614.2-201ENST00000426040 255 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 ZNF863P-201ENST00000426746 417 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.34□□□□□ -2.03
CX3CR1P49238 ATP5F1P1-201ENST00000433775 569 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.34□□□□□ -2.03
CX3CR1P49238 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.34□□□□□ -2.03
CX3CR1P49238 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.34□□□□□ -2.03
CX3CR1P49238 MTND1P9-201ENST00000453775 944 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 AC027673.1-201ENST00000456245 405 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 USP9YP25-201ENST00000457708 443 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 HMGB1P36-201ENST00000487709 576 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.34□□□□□ -2.03
CX3CR1P49238 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.34□□□□□ -2.03
CX3CR1P49238 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.34□□□□□ -2.03
CX3CR1P49238 AC090136.1-201ENST00000520009 240 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CX3CR1P49238 COX6CP5-201ENST00000527162 228 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.34□□□□□ -2.03
CX3CR1P49238 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.34□□□□□ -2.03
CX3CR1P49238 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CX3CR1P49238 MIR3117-201ENST00000584034 78 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.34□□□□□ -2.03
CX3CR1P49238 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.34□□□□□ -2.03
CX3CR1P49238 AC080013.3-201ENST00000606839 578 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.34□□□□□ -2.03
CX3CR1P49238 AC010133.1-201ENST00000615809 842 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 AC009268.2-201ENST00000621925 457 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.34□□□□□ -2.03
CX3CR1P49238 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 MIR7515-201ENST00000637837 67 ntBASIC2.34□□□□□ -2.03
CX3CR1P49238 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
CX3CR1P49238 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.34□□□□□ -2.04
CX3CR1P49238 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.34□□□□□ -2.04
CX3CR1P49238 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.34□□□□□ -2.04
CX3CR1P49238 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CX3CR1P49238 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CX3CR1P49238 AC135776.4-201ENST00000624300 1904 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.33□□□□□ -2.04
CX3CR1P49238 RNU4-68P-201ENST00000364314 141 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 RNU1-112P-201ENST00000364401 164 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 RNU6-621P-201ENST00000364752 109 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 RNU6-754P-201ENST00000391166 107 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.33□□□□□ -2.04
CX3CR1P49238 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.33□□□□□ -2.04
CX3CR1P49238 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.33□□□□□ -2.04
CX3CR1P49238 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 RPS24P13-201ENST00000442520 397 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 AL135938.1-201ENST00000443141 297 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 AC007327.1-201ENST00000447461 264 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 RPL21P134-201ENST00000453468 483 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.33□□□□□ -2.04
CX3CR1P49238 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.33□□□□□ -2.04
CX3CR1P49238 S100A11P2-201ENST00000467589 312 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 AC104563.1-201ENST00000476147 376 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 EIF4EP3-201ENST00000498782 656 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.33□□□□□ -2.04
CX3CR1P49238 AC079395.1-201ENST00000510981 262 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 RNA5SP471-201ENST00000516971 106 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 HMGB1P41-201ENST00000520234 440 ntBASIC2.33□□□□□ -2.04
CX3CR1P49238 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms