Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 AC009961.3-201ENST00000449832 765 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 USP9YP25-201ENST00000457708 443 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 AL135752.1-201ENST00000479477 471 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 HMGB1P36-201ENST00000487709 576 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 AC008716.1-201ENST00000511084 513 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 RNU6-928P-201ENST00000516876 104 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 AL132857.1-201ENST00000555180 708 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 GTF3AP2-201ENST00000557014 266 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 AC022662.1-201ENST00000580252 331 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 AL353997.4-201ENST00000586196 166 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 MTCO2P2-201ENST00000591258 225 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 BBIP1P1-201ENST00000602999 279 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 AL356575.1-201ENST00000603008 283 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 NRBF2P5-201ENST00000603087 788 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 ATP1B3P1-201ENST00000605365 821 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 AC245297.2-201ENST00000610119 565 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 AC006213.4-201ENST00000616184 634 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 OR4G3P-201ENST00000633500 913 ntBASIC2.34□□□□□ -2.03
CSNK1A1P48729 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.34□□□□□ -2.03
CSNK1A1P48729 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CSNK1A1P48729 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CSNK1A1P48729 AL137003.2-201ENST00000606924 2538 ntBASIC2.34□□□□□ -2.04
CSNK1A1P48729 AP000776.1-201ENST00000530032 1663 ntBASIC2.34□□□□□ -2.04
CSNK1A1P48729 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CSNK1A1P48729 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.33□□□□□ -2.04
CSNK1A1P48729 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.33□□□□□ -2.04
CSNK1A1P48729 AC007785.2-201ENST00000598627 1916 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CSNK1A1P48729 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CSNK1A1P48729 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CSNK1A1P48729 OR5J1P-201ENST00000313544 939 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CSNK1A1P48729 RNU6-636P-201ENST00000384598 107 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 RNA5SP210-201ENST00000391034 120 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 AL356057.3-201ENST00000402607 340 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CSNK1A1P48729 USP9YP33-201ENST00000412220 421 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.33□□□□□ -2.04
CSNK1A1P48729 AC013410.2-201ENST00000422627 201 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.33□□□□□ -2.04
CSNK1A1P48729 AC009414.1-201ENST00000427200 443 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.33□□□□□ -2.04
CSNK1A1P48729 OR4K11P-201ENST00000431829 904 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 USP9YP35-201ENST00000435696 412 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 RPS15AP7-201ENST00000439294 405 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 MTCYBP3-201ENST00000445588 1137 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.33□□□□□ -2.04
CSNK1A1P48729 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.33□□□□□ -2.04
CSNK1A1P48729 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.33□□□□□ -2.04
CSNK1A1P48729 snoU13.8-201ENST00000458890 104 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 SNORD109B-201ENST00000458961 67 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 SNORD109A-201ENST00000459128 67 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.33□□□□□ -2.04
CSNK1A1P48729 AC104090.1-201ENST00000506341 1171 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 CDC42P4-201ENST00000510507 563 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 TBCAP3-201ENST00000512475 312 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 AC096725.1-201ENST00000514266 313 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 SCARNA1-201ENST00000517138 166 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 AP003497.1-201ENST00000528472 562 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 MTND1P8-201ENST00000571424 950 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 MIR3616-201ENST00000584070 92 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 VN1R90P-201ENST00000595717 726 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.33□□□□□ -2.04
CSNK1A1P48729 AC011451.2-201ENST00000604303 598 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.33□□□□□ -2.04
CSNK1A1P48729 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.33□□□□□ -2.04
CSNK1A1P48729 AL158211.4-201ENST00000606988 584 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 AC024933.1-201ENST00000608472 348 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 AC245517.5-201ENST00000611529 162 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 AC079395.3-201ENST00000615161 484 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.33□□□□□ -2.04
CSNK1A1P48729 AC011477.1-204ENST00000623416 1325 ntBASIC2.33□□□□□ -2.04
CSNK1A1P48729 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CSNK1A1P48729 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
CSNK1A1P48729 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.32□□□□□ -2.04
CSNK1A1P48729 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CSNK1A1P48729 RNU6-289P-201ENST00000364093 107 ntBASIC2.32□□□□□ -2.04
CSNK1A1P48729 RNU6-777P-201ENST00000364265 104 ntBASIC2.32□□□□□ -2.04
CSNK1A1P48729 SNORA68.1-201ENST00000364537 132 ntBASIC2.32□□□□□ -2.04
CSNK1A1P48729 RNU1-100P-201ENST00000365255 165 ntBASIC2.32□□□□□ -2.04
CSNK1A1P48729 RNU6-359P-201ENST00000365466 108 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms