Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.91□□□□□ -1.94
CDX1P47902 MIR4429-201ENST00000580105 73 ntBASIC2.91□□□□□ -1.94
CDX1P47902 MIR4444-1-201ENST00000581696 74 ntBASIC2.91□□□□□ -1.94
CDX1P47902 MIR4444-2-201ENST00000584390 74 ntBASIC2.91□□□□□ -1.94
CDX1P47902 AL133393.1-201ENST00000603277 287 ntBASIC2.91□□□□□ -1.94
CDX1P47902 AL670379.6-201ENST00000603753 252 ntBASIC2.91□□□□□ -1.94
CDX1P47902 AL670379.11-201ENST00000604059 253 ntBASIC2.91□□□□□ -1.94
CDX1P47902 NUTF2P8-201ENST00000604593 363 ntBASIC2.91□□□□□ -1.94
CDX1P47902 AC008162.1-201ENST00000604718 254 ntBASIC2.91□□□□□ -1.94
CDX1P47902 AL670379.1-201ENST00000604752 252 ntBASIC2.91□□□□□ -1.94
CDX1P47902 AL670379.5-201ENST00000605253 252 ntBASIC2.91□□□□□ -1.94
CDX1P47902 AL670379.12-201ENST00000605291 253 ntBASIC2.91□□□□□ -1.94
CDX1P47902 AL670379.8-201ENST00000605353 252 ntBASIC2.91□□□□□ -1.94
CDX1P47902 AL670379.7-201ENST00000605823 252 ntBASIC2.91□□□□□ -1.94
CDX1P47902 RNU1-30P-201ENST00000606575 163 ntBASIC2.91□□□□□ -1.94
CDX1P47902 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.91□□□□□ -1.94
CDX1P47902 AC008264.2-201ENST00000610193 3731 ntBASIC2.91□□□□□ -1.94
CDX1P47902 AC022336.2-201ENST00000568966 2538 ntBASIC2.91□□□□□ -1.94
CDX1P47902 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.91□□□□□ -1.94
CDX1P47902 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.91□□□□□ -1.94
CDX1P47902 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CDX1P47902 ZNF285B-201ENST00000561698 1767 ntBASIC2.9□□□□□ -1.94
CDX1P47902 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CDX1P47902 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.9□□□□□ -1.95
CDX1P47902 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDX1P47902 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CDX1P47902 RNU2-36P-201ENST00000410361 191 ntBASIC2.9□□□□□ -1.95
CDX1P47902 RN7SKP123-201ENST00000410732 291 ntBASIC2.9□□□□□ -1.95
CDX1P47902 HMGN1P14-201ENST00000412459 517 ntBASIC2.9□□□□□ -1.95
CDX1P47902 AC093578.1-201ENST00000415219 368 ntBASIC2.9□□□□□ -1.95
CDX1P47902 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX1P47902 SEPT2P1-201ENST00000419651 180 ntBASIC2.9□□□□□ -1.95
CDX1P47902 AL035423.1-201ENST00000420331 213 ntBASIC2.9□□□□□ -1.95
CDX1P47902 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.9□□□□□ -1.95
CDX1P47902 MTND1P28-201ENST00000435623 950 ntBASIC2.9□□□□□ -1.95
CDX1P47902 ARPC3P1-201ENST00000437218 533 ntBASIC2.9□□□□□ -1.95
CDX1P47902 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX1P47902 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.9□□□□□ -1.95
CDX1P47902 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX1P47902 NEFMP1-201ENST00000443423 1006 ntBASIC2.9□□□□□ -1.95
CDX1P47902 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX1P47902 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX1P47902 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDX1P47902 AL033528.1-201ENST00000453780 140 ntBASIC2.9□□□□□ -1.95
CDX1P47902 SNORD105B-201ENST00000458770 79 ntBASIC2.9□□□□□ -1.95
CDX1P47902 AC087588.1-201ENST00000462203 316 ntBASIC2.9□□□□□ -1.95
CDX1P47902 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
CDX1P47902 AC138853.1-201ENST00000503549 823 ntBASIC2.9□□□□□ -1.95
CDX1P47902 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.9□□□□□ -1.95
CDX1P47902 RNA5SP337-201ENST00000517007 109 ntBASIC2.9□□□□□ -1.95
CDX1P47902 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.9□□□□□ -1.95
CDX1P47902 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX1P47902 AC068135.2-201ENST00000569293 1028 ntBASIC2.9□□□□□ -1.95
CDX1P47902 AC137800.2-201ENST00000574375 120 ntBASIC2.9□□□□□ -1.95
CDX1P47902 BNIP3P33-201ENST00000598912 569 ntBASIC2.9□□□□□ -1.95
CDX1P47902 AC103710.2-201ENST00000609912 942 ntBASIC2.9□□□□□ -1.95
CDX1P47902 MIR6075-201ENST00000620782 95 ntBASIC2.9□□□□□ -1.95
CDX1P47902 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX1P47902 AL589994.2-201ENST00000621124 579 ntBASIC2.9□□□□□ -1.95
CDX1P47902 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.9□□□□□ -1.95
CDX1P47902 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
CDX1P47902 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDX1P47902 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.9□□□□□ -1.95
CDX1P47902 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
CDX1P47902 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.9□□□□□ -1.95
CDX1P47902 MTND5P7-201ENST00000413558 1798 ntBASIC2.89□□□□□ -1.95
CDX1P47902 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
CDX1P47902 GNG5P1-201ENST00000255500 204 ntBASIC2.89□□□□□ -1.95
CDX1P47902 FTLP6-201ENST00000355274 422 ntBASIC2.89□□□□□ -1.95
CDX1P47902 RNA5SP124-201ENST00000362739 110 ntBASIC2.89□□□□□ -1.95
CDX1P47902 RNU6-1167P-201ENST00000363227 94 ntBASIC2.89□□□□□ -1.95
CDX1P47902 RNU6-799P-201ENST00000363567 107 ntBASIC2.89□□□□□ -1.95
CDX1P47902 RNY4P34-201ENST00000364779 95 ntBASIC2.89□□□□□ -1.95
CDX1P47902 SNORA5A-201ENST00000384111 134 ntBASIC2.89□□□□□ -1.95
CDX1P47902 RNU6-217P-201ENST00000384164 104 ntBASIC2.89□□□□□ -1.95
CDX1P47902 RPL7P60-201ENST00000397636 735 ntBASIC2.89□□□□□ -1.95
CDX1P47902 RPS3AP3-201ENST00000411933 242 ntBASIC2.89□□□□□ -1.95
CDX1P47902 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.89□□□□□ -1.95
CDX1P47902 AC104651.1-201ENST00000427559 735 ntBASIC2.89□□□□□ -1.95
CDX1P47902 DPPA2P1-201ENST00000428060 556 ntBASIC2.89□□□□□ -1.95
CDX1P47902 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.89□□□□□ -1.95
CDX1P47902 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.89□□□□□ -1.95
CDX1P47902 AC010153.1-201ENST00000432862 727 ntBASIC2.89□□□□□ -1.95
CDX1P47902 AL353705.1-201ENST00000433468 480 ntBASIC2.89□□□□□ -1.95
CDX1P47902 GOT2P5-201ENST00000433995 546 ntBASIC2.89□□□□□ -1.95
CDX1P47902 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.89□□□□□ -1.95
CDX1P47902 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.89□□□□□ -1.95
CDX1P47902 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.89□□□□□ -1.95
CDX1P47902 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.89□□□□□ -1.95
CDX1P47902 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.89□□□□□ -1.95
CDX1P47902 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.89□□□□□ -1.95
CDX1P47902 RN7SL432P-201ENST00000484057 298 ntBASIC2.89□□□□□ -1.95
CDX1P47902 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.89□□□□□ -1.95
CDX1P47902 NDUFB4P2-201ENST00000509515 391 ntBASIC2.89□□□□□ -1.95
CDX1P47902 RAC1P2-201ENST00000511164 579 ntBASIC2.89□□□□□ -1.95
CDX1P47902 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.89□□□□□ -1.95
CDX1P47902 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.89□□□□□ -1.95
CDX1P47902 RN7SKP18-201ENST00000516005 275 ntBASIC2.89□□□□□ -1.95
CDX1P47902 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
CDX1P47902 AC026403.1-201ENST00000518938 295 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms