Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 MTCO1P23-201ENST00000415223 1526 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
BRCA1P38398 FAM35CP-201ENST00000554755 2470 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.45□□□□□ -2.02
BRCA1P38398 AL139276.1-201ENST00000311910 1001 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 SNORA14A-201ENST00000364773 135 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 AL627390.1-201ENST00000396055 340 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 RPS4XP3-201ENST00000398541 413 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 AC109780.2-201ENST00000413467 845 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 MTND2P5-201ENST00000432656 1006 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 AC092393.1-201ENST00000439625 742 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 AL121871.1-201ENST00000443413 436 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 AL031183.1-201ENST00000457667 207 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 RPL30P14-201ENST00000482744 348 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 Y_RNA.670-201ENST00000516255 105 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 ERHP1-201ENST00000523006 310 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
BRCA1P38398 AL163153.1-201ENST00000554223 283 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 AC106900.2-201ENST00000604994 317 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 AC068831.7-201ENST00000616954 363 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 AL356585.4-201ENST00000623078 1229 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 AC090897.3-201ENST00000636973 1157 ntBASIC2.45□□□□□ -2.02
BRCA1P38398 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
BRCA1P38398 MIR337-201ENST00000362281 93 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 MIR217-201ENST00000384817 110 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 MIR506-201ENST00000384998 124 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 AL021407.1-201ENST00000404531 386 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 AC009237.2-201ENST00000421358 284 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 UBE2V1P6-201ENST00000430840 422 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 MTND4P6-201ENST00000438297 472 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.44□□□□□ -2.02
BRCA1P38398 RPL39P40-201ENST00000445481 146 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.44□□□□□ -2.02
BRCA1P38398 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.44□□□□□ -2.02
BRCA1P38398 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.44□□□□□ -2.02
BRCA1P38398 AC091860.1-201ENST00000505723 432 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 AC010460.2-201ENST00000509054 677 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 AC022483.1-201ENST00000514020 567 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.44□□□□□ -2.02
BRCA1P38398 MIR3670-2-201ENST00000582974 65 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 MIR3670-1-201ENST00000584160 65 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 MIR5002-201ENST00000584713 97 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 MIR3670-3-201ENST00000584855 65 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 MIR3670-4-201ENST00000612260 65 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 AL390240.1-201ENST00000612950 384 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 AC008759.3-201ENST00000613300 508 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 AC011330.2-201ENST00000621680 635 ntBASIC2.44□□□□□ -2.02
BRCA1P38398 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
BRCA1P38398 Y_RNA.25-201ENST00000362528 102 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
BRCA1P38398 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
BRCA1P38398 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
BRCA1P38398 AL035405.1-201ENST00000400795 710 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AL356131.1-201ENST00000405826 414 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.43□□□□□ -2.02
BRCA1P38398 AC096533.1-201ENST00000411645 353 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AP000275.1-201ENST00000411943 390 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 RPL23AP39-201ENST00000415533 405 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.43□□□□□ -2.02
BRCA1P38398 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.43□□□□□ -2.02
BRCA1P38398 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.43□□□□□ -2.02
BRCA1P38398 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.43□□□□□ -2.02
BRCA1P38398 CBWD4P-201ENST00000445695 655 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AC093392.2-201ENST00000450682 337 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 PNPLA4P1-201ENST00000458328 305 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 RNU5A-7P-201ENST00000515979 116 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 RNA5SP402-201ENST00000517148 110 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AC239860.2-201ENST00000525886 270 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.43□□□□□ -2.02
BRCA1P38398 RN7SL622P-201ENST00000585292 275 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AC092474.3-201ENST00000603022 568 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AL445435.1-201ENST00000604232 665 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AP005137.2-201ENST00000609238 400 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AC073592.7-201ENST00000623659 507 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AC110079.1-202ENST00000635213 138 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.43□□□□□ -2.02
BRCA1P38398 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
BRCA1P38398 AP001486.2-201ENST00000561652 5113 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
BRCA1P38398 SUGT1P1-201ENST00000379514 476 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 FGF7P8-201ENST00000402994 292 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AL592310.1-201ENST00000414330 671 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 RPL27AP8-201ENST00000424277 446 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.43□□□□□ -2.02
BRCA1P38398 AC024082.2-201ENST00000434771 238 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.43□□□□□ -2.02
BRCA1P38398 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.43□□□□□ -2.02
BRCA1P38398 RPL39P6-201ENST00000448289 150 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.43□□□□□ -2.02
BRCA1P38398 RNU6-420P-201ENST00000458780 107 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.43□□□□□ -2.02
BRCA1P38398 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.43□□□□□ -2.02
BRCA1P38398 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.43□□□□□ -2.02
BRCA1P38398 MTCO3P27-201ENST00000514397 196 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
BRCA1P38398 AC104417.1-201ENST00000523974 751 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.43□□□□□ -2.02
BRCA1P38398 CYB5AP5-201ENST00000549779 389 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AC023825.1-201ENST00000566704 1030 ntBASIC2.43□□□□□ -2.02
BRCA1P38398 AC034268.2-201ENST00000571784 482 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms