Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC016597.2-201ENST00000613256 341 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 AC006133.1-201ENST00000617106 264 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 SNHG22-203ENST00000617833 660 ntBASIC3.13□□□□□ -1.91
CTNNA1P35221 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTNNA1P35221 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.13□□□□□ -1.91
CTNNA1P35221 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTNNA1P35221 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTNNA1P35221 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.12□□□□□ -1.91
CTNNA1P35221 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.12□□□□□ -1.91
CTNNA1P35221 MIR22-201ENST00000362190 85 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 RNU6-433P-201ENST00000363216 104 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 RNA5SP88-201ENST00000365560 109 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 AL513475.1-201ENST00000406602 315 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 RNU2-25P-201ENST00000411041 191 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 SSR1P2-201ENST00000415208 787 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 AL451074.5-201ENST00000415894 435 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 USP9YP13-201ENST00000417797 480 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.12□□□□□ -1.91
CTNNA1P35221 AL035407.1-201ENST00000429211 571 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.12□□□□□ -1.91
CTNNA1P35221 SNRPEP9-201ENST00000436794 238 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 RPS29P6-201ENST00000438196 145 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 AL513043.1-201ENST00000439124 535 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 AC117440.1-201ENST00000474107 571 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 RPS29P2-201ENST00000479278 136 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 RPS15AP34-201ENST00000487776 387 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.12□□□□□ -1.91
CTNNA1P35221 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CTNNA1P35221 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 RNU6-311P-201ENST00000516224 102 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.12□□□□□ -1.91
CTNNA1P35221 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.12□□□□□ -1.91
CTNNA1P35221 AP004247.1-201ENST00000531556 1289 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.12□□□□□ -1.91
CTNNA1P35221 DPPA3P3-201ENST00000603842 430 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 MIR7112-201ENST00000616126 65 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 AC012150.2-201ENST00000621300 544 ntBASIC3.12□□□□□ -1.91
CTNNA1P35221 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.12□□□□□ -1.91
CTNNA1P35221 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTNNA1P35221 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CTNNA1P35221 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CTNNA1P35221 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.11□□□□□ -1.91
CTNNA1P35221 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CTNNA1P35221 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.11□□□□□ -1.91
CTNNA1P35221 RNU6-769P-201ENST00000384407 104 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 ATP5F1P3-201ENST00000397213 657 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.11□□□□□ -1.91
CTNNA1P35221 AL359634.1-202ENST00000404721 284 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.11□□□□□ -1.91
CTNNA1P35221 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.11□□□□□ -1.91
CTNNA1P35221 MTND1P32-201ENST00000433043 938 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 UBE2FP3-201ENST00000436366 524 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 RPL21P2-201ENST00000440049 481 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 AC005094.1-201ENST00000440420 368 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 MTATP6P30-201ENST00000443540 664 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 PRDX3P3-201ENST00000447765 522 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.11□□□□□ -1.91
CTNNA1P35221 ANKRD26P4-201ENST00000455755 950 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 RPL37P6-201ENST00000460682 294 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 AC126182.1-201ENST00000478134 357 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTNNA1P35221 RNA5SP76-201ENST00000516277 87 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 COX6CP5-201ENST00000527162 228 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 AP000907.2-201ENST00000530827 353 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.11□□□□□ -1.91
CTNNA1P35221 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CTNNA1P35221 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.11□□□□□ -1.91
CTNNA1P35221 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.11□□□□□ -1.91
CTNNA1P35221 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.11□□□□□ -1.91
CTNNA1P35221 AL450336.1-201ENST00000605180 586 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 AC004805.2-201ENST00000605382 482 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.11□□□□□ -1.91
CTNNA1P35221 AP001002.2-201ENST00000625137 386 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 MIR6733-201ENST00000635723 61 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.11□□□□□ -1.91
CTNNA1P35221 MTND5P29-201ENST00000458676 1807 ntBASIC3.11□□□□□ -1.91
CTNNA1P35221 SNORA63.1-201ENST00000362493 131 ntBASIC3.1□□□□□ -1.91
CTNNA1P35221 RNU6-461P-201ENST00000364195 107 ntBASIC3.1□□□□□ -1.91
CTNNA1P35221 SNORA68.1-201ENST00000364537 132 ntBASIC3.1□□□□□ -1.91
CTNNA1P35221 MIR513B-201ENST00000385136 84 ntBASIC3.1□□□□□ -1.91
CTNNA1P35221 U3.19-201ENST00000390893 196 ntBASIC3.1□□□□□ -1.91
CTNNA1P35221 RNU6-584P-201ENST00000410350 95 ntBASIC3.1□□□□□ -1.91
CTNNA1P35221 RPL19P1-201ENST00000411635 428 ntBASIC3.1□□□□□ -1.91
CTNNA1P35221 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNNA1P35221 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNNA1P35221 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.1□□□□□ -1.91
CTNNA1P35221 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.1□□□□□ -1.91
CTNNA1P35221 Z80107.1-201ENST00000436830 412 ntBASIC3.1□□□□□ -1.91
CTNNA1P35221 AC006028.1-201ENST00000438379 402 ntBASIC3.1□□□□□ -1.91
CTNNA1P35221 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNNA1P35221 DPPA3P1-201ENST00000448050 469 ntBASIC3.1□□□□□ -1.91
CTNNA1P35221 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.1□□□□□ -1.91
CTNNA1P35221 AC055855.1-201ENST00000489563 579 ntBASIC3.1□□□□□ -1.91
CTNNA1P35221 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CTNNA1P35221 AC100870.1-201ENST00000522035 505 ntBASIC3.1□□□□□ -1.91
CTNNA1P35221 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.1□□□□□ -1.91
CTNNA1P35221 BCRP9-201ENST00000605312 388 ntBASIC3.1□□□□□ -1.91
CTNNA1P35221 AC091965.4-201ENST00000607691 587 ntBASIC3.1□□□□□ -1.91
CTNNA1P35221 AC013562.2-201ENST00000611632 603 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms