Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AL354719.1-201ENST00000406535 843 ntBASIC3□□□□□ -1.93
USP6P35125 RNU2-47P-201ENST00000410649 186 ntBASIC3□□□□□ -1.93
USP6P35125 RPL23AP36-201ENST00000413895 458 ntBASIC3□□□□□ -1.93
USP6P35125 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3□□□□□ -1.93
USP6P35125 AC007390.1-201ENST00000415722 356 ntBASIC3□□□□□ -1.93
USP6P35125 MORF4L1P6-201ENST00000418771 268 ntBASIC3□□□□□ -1.93
USP6P35125 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3□□□□□ -1.93
USP6P35125 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3□□□□□ -1.93
USP6P35125 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC3□□□□□ -1.93
USP6P35125 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3□□□□□ -1.93
USP6P35125 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3□□□□□ -1.93
USP6P35125 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3□□□□□ -1.93
USP6P35125 SUMO2P2-201ENST00000456482 255 ntBASIC3□□□□□ -1.93
USP6P35125 RN7SL499P-201ENST00000481141 276 ntBASIC3□□□□□ -1.93
USP6P35125 AC108729.1-201ENST00000487812 947 ntBASIC3□□□□□ -1.93
USP6P35125 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3□□□□□ -1.93
USP6P35125 AC021146.8-201ENST00000507455 733 ntBASIC3□□□□□ -1.93
USP6P35125 AC004062.1-201ENST00000509926 645 ntBASIC3□□□□□ -1.93
USP6P35125 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3□□□□□ -1.93
USP6P35125 AC006499.2-201ENST00000513470 337 ntBASIC3□□□□□ -1.93
USP6P35125 AC108729.3-201ENST00000513484 108 ntBASIC3□□□□□ -1.93
USP6P35125 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3□□□□□ -1.93
USP6P35125 AC022861.1-201ENST00000522981 663 ntBASIC3□□□□□ -1.93
USP6P35125 MTCO2P15-201ENST00000532655 656 ntBASIC3□□□□□ -1.93
USP6P35125 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3□□□□□ -1.93
USP6P35125 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3□□□□□ -1.93
USP6P35125 AL590282.1-201ENST00000610379 1136 ntBASIC3□□□□□ -1.93
USP6P35125 AC097478.2-201ENST00000610572 514 ntBASIC3□□□□□ -1.93
USP6P35125 AC092106.3-201ENST00000611308 722 ntBASIC3□□□□□ -1.93
USP6P35125 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3□□□□□ -1.93
USP6P35125 AC006963.1-201ENST00000624003 1052 ntBASIC3□□□□□ -1.93
USP6P35125 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3□□□□□ -1.93
USP6P35125 AP000776.1-201ENST00000530032 1663 ntBASIC3□□□□□ -1.93
USP6P35125 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3□□□□□ -1.93
USP6P35125 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
USP6P35125 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
USP6P35125 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.99□□□□□ -1.93
USP6P35125 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
USP6P35125 FRG1BP-201ENST00000278882 761 ntBASIC2.99□□□□□ -1.93
USP6P35125 SNORA51.2-201ENST00000364595 132 ntBASIC2.99□□□□□ -1.93
USP6P35125 RNU6-621P-201ENST00000364752 109 ntBASIC2.99□□□□□ -1.93
USP6P35125 U8.8-201ENST00000365399 135 ntBASIC2.99□□□□□ -1.93
USP6P35125 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
USP6P35125 OR5H15-201ENST00000383696 930 ntBASIC2.99□□□□□ -1.93
USP6P35125 SNORA67.3-201ENST00000384366 140 ntBASIC2.99□□□□□ -1.93
USP6P35125 RNU2-2P-201ENST00000410396 191 ntBASIC2.99□□□□□ -1.93
USP6P35125 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.99□□□□□ -1.93
USP6P35125 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.99□□□□□ -1.93
USP6P35125 MTND4P6-201ENST00000438297 472 ntBASIC2.99□□□□□ -1.93
USP6P35125 HSPE1P28-201ENST00000443139 211 ntBASIC2.99□□□□□ -1.93
USP6P35125 AC114981.1-201ENST00000503897 678 ntBASIC2.99□□□□□ -1.93
USP6P35125 COX7A2P2-201ENST00000505291 250 ntBASIC2.99□□□□□ -1.93
USP6P35125 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.99□□□□□ -1.93
USP6P35125 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.99□□□□□ -1.93
USP6P35125 DEFB131D-201ENST00000526803 184 ntBASIC2.99□□□□□ -1.93
USP6P35125 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.99□□□□□ -1.93
USP6P35125 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
USP6P35125 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.99□□□□□ -1.93
USP6P35125 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.99□□□□□ -1.93
USP6P35125 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.99□□□□□ -1.93
USP6P35125 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.99□□□□□ -1.93
USP6P35125 MIR4760-201ENST00000585040 80 ntBASIC2.99□□□□□ -1.93
USP6P35125 AC080013.4-201ENST00000607624 649 ntBASIC2.99□□□□□ -1.93
USP6P35125 U2.15-201ENST00000611544 191 ntBASIC2.99□□□□□ -1.93
USP6P35125 U2.16-201ENST00000613119 191 ntBASIC2.99□□□□□ -1.93
USP6P35125 U2.12-201ENST00000613778 191 ntBASIC2.99□□□□□ -1.93
USP6P35125 U2.20-201ENST00000613956 192 ntBASIC2.99□□□□□ -1.93
USP6P35125 U2.9-201ENST00000615427 191 ntBASIC2.99□□□□□ -1.93
USP6P35125 U2.11-201ENST00000616345 191 ntBASIC2.99□□□□□ -1.93
USP6P35125 U2.2-201ENST00000616535 191 ntBASIC2.99□□□□□ -1.93
USP6P35125 U2.3-201ENST00000617785 191 ntBASIC2.99□□□□□ -1.93
USP6P35125 U2.19-201ENST00000618602 191 ntBASIC2.99□□□□□ -1.93
USP6P35125 RNU2-1-201ENST00000618664 191 ntBASIC2.99□□□□□ -1.93
USP6P35125 U2.6-201ENST00000619225 191 ntBASIC2.99□□□□□ -1.93
USP6P35125 U2.5-201ENST00000619465 191 ntBASIC2.99□□□□□ -1.93
USP6P35125 U2.10-201ENST00000620268 191 ntBASIC2.99□□□□□ -1.93
USP6P35125 AC048347.1-201ENST00000624621 427 ntBASIC2.99□□□□□ -1.93
USP6P35125 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.99□□□□□ -1.93
USP6P35125 AC093591.3-201ENST00000634516 308 ntBASIC2.99□□□□□ -1.93
USP6P35125 MIR219B-201ENST00000637023 88 ntBASIC2.99□□□□□ -1.93
USP6P35125 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.99□□□□□ -1.93
USP6P35125 AL390862.1-201ENST00000635467 1469 ntBASIC2.99□□□□□ -1.93
USP6P35125 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
USP6P35125 AL079343.1-201ENST00000572358 1771 ntBASIC2.98□□□□□ -1.93
USP6P35125 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
USP6P35125 Y_RNA.40-201ENST00000362645 93 ntBASIC2.98□□□□□ -1.93
USP6P35125 Y_RNA.140-201ENST00000363474 103 ntBASIC2.98□□□□□ -1.93
USP6P35125 Y_RNA.269-201ENST00000364685 89 ntBASIC2.98□□□□□ -1.93
USP6P35125 RNU6-83P-201ENST00000384568 112 ntBASIC2.98□□□□□ -1.93
USP6P35125 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.98□□□□□ -1.93
USP6P35125 HMGB1P11-201ENST00000413899 637 ntBASIC2.98□□□□□ -1.93
USP6P35125 RPL7P30-201ENST00000420888 709 ntBASIC2.98□□□□□ -1.93
USP6P35125 AL139421.1-201ENST00000423010 169 ntBASIC2.98□□□□□ -1.93
USP6P35125 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.98□□□□□ -1.93
USP6P35125 MTCYBP45-201ENST00000435243 565 ntBASIC2.98□□□□□ -1.93
USP6P35125 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
USP6P35125 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.98□□□□□ -1.93
USP6P35125 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
USP6P35125 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.98□□□□□ -1.93
USP6P35125 HMGB3P15-201ENST00000507326 574 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms