Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC004777.1-201ENST00000624317 287 ntBASIC1.3□□□□□ -2.2
CKS2P33552 AP003400.5-201ENST00000624827 617 ntBASIC1.3□□□□□ -2.2
CKS2P33552 AC007785.2-201ENST00000598627 1916 ntBASIC1.3□□□□□ -2.2
CKS2P33552 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CKS2P33552 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.29□□□□□ -2.2
CKS2P33552 ZNF702P-202ENST00000434269 1966 ntBASIC1.29□□□□□ -2.2
CKS2P33552 RNA5SP276-201ENST00000362580 94 ntBASIC1.29□□□□□ -2.2
CKS2P33552 SNORA5B-201ENST00000363786 132 ntBASIC1.29□□□□□ -2.2
CKS2P33552 SNORD48-201ENST00000364953 64 ntBASIC1.29□□□□□ -2.2
CKS2P33552 MIR218-1-201ENST00000384999 110 ntBASIC1.29□□□□□ -2.2
CKS2P33552 AL023284.1-201ENST00000403956 276 ntBASIC1.29□□□□□ -2.2
CKS2P33552 RPS20P15-201ENST00000412792 311 ntBASIC1.29□□□□□ -2.2
CKS2P33552 AL356867.1-201ENST00000429623 299 ntBASIC1.29□□□□□ -2.2
CKS2P33552 AL445646.1-201ENST00000431784 216 ntBASIC1.29□□□□□ -2.2
CKS2P33552 RPS15AP5-201ENST00000436276 388 ntBASIC1.29□□□□□ -2.2
CKS2P33552 BNIP3P2-201ENST00000441221 577 ntBASIC1.29□□□□□ -2.2
CKS2P33552 AL500527.1-201ENST00000448532 255 ntBASIC1.29□□□□□ -2.2
CKS2P33552 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.29□□□□□ -2.2
CKS2P33552 AC104108.1-201ENST00000509930 412 ntBASIC1.29□□□□□ -2.2
CKS2P33552 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.29□□□□□ -2.2
CKS2P33552 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.29□□□□□ -2.2
CKS2P33552 AC107393.1-201ENST00000512403 346 ntBASIC1.29□□□□□ -2.2
CKS2P33552 SNORA31.6-201ENST00000516241 130 ntBASIC1.29□□□□□ -2.2
CKS2P33552 MIR892C-201ENST00000516410 77 ntBASIC1.29□□□□□ -2.2
CKS2P33552 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.29□□□□□ -2.2
CKS2P33552 AP005639.2-201ENST00000527592 928 ntBASIC1.29□□□□□ -2.2
CKS2P33552 CBX3P7-201ENST00000532876 502 ntBASIC1.29□□□□□ -2.2
CKS2P33552 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CKS2P33552 SETP7-201ENST00000552169 453 ntBASIC1.29□□□□□ -2.2
CKS2P33552 AL133241.1-201ENST00000556832 487 ntBASIC1.29□□□□□ -2.2
CKS2P33552 AC009063.1-201ENST00000563342 702 ntBASIC1.29□□□□□ -2.2
CKS2P33552 MIR3200-201ENST00000580767 85 ntBASIC1.29□□□□□ -2.2
CKS2P33552 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CKS2P33552 AC078899.2-201ENST00000595282 212 ntBASIC1.29□□□□□ -2.2
CKS2P33552 AC008498.1-201ENST00000613012 531 ntBASIC1.29□□□□□ -2.2
CKS2P33552 AC116618.1-201ENST00000634617 774 ntBASIC1.29□□□□□ -2.2
CKS2P33552 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CKS2P33552 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.29□□□□□ -2.2
CKS2P33552 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
CKS2P33552 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CKS2P33552 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CKS2P33552 SNORD46.1-201ENST00000364139 104 ntBASIC1.28□□□□□ -2.2
CKS2P33552 U3.12-201ENST00000364498 214 ntBASIC1.28□□□□□ -2.2
CKS2P33552 RNU6-1083P-201ENST00000384022 107 ntBASIC1.28□□□□□ -2.2
CKS2P33552 RNU6-217P-201ENST00000384164 104 ntBASIC1.28□□□□□ -2.2
CKS2P33552 RNU6-750P-201ENST00000390946 107 ntBASIC1.28□□□□□ -2.2
CKS2P33552 RN7SKP158-201ENST00000410453 326 ntBASIC1.28□□□□□ -2.2
CKS2P33552 RNU2-47P-201ENST00000410649 186 ntBASIC1.28□□□□□ -2.2
CKS2P33552 AC096664.2-201ENST00000411843 406 ntBASIC1.28□□□□□ -2.2
CKS2P33552 AL133384.1-201ENST00000412744 351 ntBASIC1.28□□□□□ -2.2
CKS2P33552 HMGB1P49-201ENST00000418882 569 ntBASIC1.28□□□□□ -2.2
CKS2P33552 AIMP1P2-201ENST00000425294 312 ntBASIC1.28□□□□□ -2.2
CKS2P33552 AL590383.1-201ENST00000428602 75 ntBASIC1.28□□□□□ -2.2
CKS2P33552 AL512637.2-201ENST00000431287 1256 ntBASIC1.28□□□□□ -2.2
CKS2P33552 MTND2P21-201ENST00000436242 1042 ntBASIC1.28□□□□□ -2.2
CKS2P33552 IFNA20P-201ENST00000436840 528 ntBASIC1.28□□□□□ -2.2
CKS2P33552 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.28□□□□□ -2.2
CKS2P33552 HSPE1P21-201ENST00000438283 308 ntBASIC1.28□□□□□ -2.2
CKS2P33552 OR10R1P-201ENST00000441524 1141 ntBASIC1.28□□□□□ -2.2
CKS2P33552 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.28□□□□□ -2.2
CKS2P33552 RPL7P12-201ENST00000446719 750 ntBASIC1.28□□□□□ -2.2
CKS2P33552 HMGN1P5-201ENST00000448591 263 ntBASIC1.28□□□□□ -2.2
CKS2P33552 RFC5P1-201ENST00000454419 874 ntBASIC1.28□□□□□ -2.2
CKS2P33552 MTCO3P2-201ENST00000457365 171 ntBASIC1.28□□□□□ -2.2
CKS2P33552 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.28□□□□□ -2.2
CKS2P33552 snoU109.1-201ENST00000459339 135 ntBASIC1.28□□□□□ -2.2
CKS2P33552 AC079203.1-201ENST00000487972 404 ntBASIC1.28□□□□□ -2.2
CKS2P33552 OR4G11P-201ENST00000492842 939 ntBASIC1.28□□□□□ -2.2
CKS2P33552 BLNK-209ENST00000495266 440 ntTSL 5 BASIC1.28□□□□□ -2.2
CKS2P33552 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.28□□□□□ -2.2
CKS2P33552 SCARNA3-201ENST00000517097 143 ntBASIC1.28□□□□□ -2.2
CKS2P33552 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.28□□□□□ -2.2
CKS2P33552 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.28□□□□□ -2.2
CKS2P33552 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.28□□□□□ -2.2
CKS2P33552 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CKS2P33552 AP003122.3-201ENST00000526316 255 ntBASIC1.28□□□□□ -2.2
CKS2P33552 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.28□□□□□ -2.2
CKS2P33552 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.28□□□□□ -2.2
CKS2P33552 AL022067.1-201ENST00000602426 454 ntBASIC1.28□□□□□ -2.2
CKS2P33552 BNIP3P4-201ENST00000604946 565 ntBASIC1.28□□□□□ -2.2
CKS2P33552 AL033523.1-201ENST00000605153 153 ntBASIC1.28□□□□□ -2.2
CKS2P33552 AC005296.1-201ENST00000616145 209 ntBASIC1.28□□□□□ -2.2
CKS2P33552 AC011330.2-201ENST00000621680 635 ntBASIC1.28□□□□□ -2.2
CKS2P33552 MIR7157-201ENST00000635801 60 ntBASIC1.28□□□□□ -2.2
CKS2P33552 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
CKS2P33552 AP006437.1-201ENST00000641440 3685 ntBASIC1.28□□□□□ -2.21
CKS2P33552 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
CKS2P33552 OR4G11P-202ENST00000642116 1414 ntBASIC1.27□□□□□ -2.21
CKS2P33552 RNU6-1159P-201ENST00000362933 107 ntBASIC1.27□□□□□ -2.21
CKS2P33552 SNORA67.3-201ENST00000384366 140 ntBASIC1.27□□□□□ -2.21
CKS2P33552 SNORA64-201ENST00000384674 134 ntBASIC1.27□□□□□ -2.21
CKS2P33552 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CKS2P33552 RNA5SP171-201ENST00000391071 115 ntBASIC1.27□□□□□ -2.21
CKS2P33552 AC016769.3-201ENST00000396562 315 ntBASIC1.27□□□□□ -2.21
CKS2P33552 HMGB1P17-201ENST00000403495 628 ntBASIC1.27□□□□□ -2.21
CKS2P33552 RNU2-15P-201ENST00000410692 191 ntBASIC1.27□□□□□ -2.21
CKS2P33552 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.27□□□□□ -2.21
CKS2P33552 AC092047.1-201ENST00000424997 240 ntBASIC1.27□□□□□ -2.21
CKS2P33552 AL356320.1-201ENST00000429616 163 ntBASIC1.27□□□□□ -2.21
CKS2P33552 AC093155.1-201ENST00000440164 826 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms