Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 TMEM167AP1-201ENST00000423409 219 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 PPP1R11P2-201ENST00000423543 382 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 AL445669.1-201ENST00000426743 755 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.62□□□□□ -1.83
TM4SF1P30408 RPL26P6-201ENST00000440913 438 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 BMI1P1-201ENST00000445879 941 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 TPT1P14-201ENST00000448018 505 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.62□□□□□ -1.83
TM4SF1P30408 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.62□□□□□ -1.83
TM4SF1P30408 HMGN1P18-201ENST00000457642 277 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.62□□□□□ -1.83
TM4SF1P30408 RNU7-59P-201ENST00000459101 61 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.62□□□□□ -1.83
TM4SF1P30408 HSPE1P6-201ENST00000479457 291 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.62□□□□□ -1.83
TM4SF1P30408 AP000403.1-201ENST00000603349 851 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 AL591516.1-201ENST00000611326 274 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 AC093838.1-201ENST00000613014 469 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.62□□□□□ -1.83
TM4SF1P30408 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 AC002076.2-201ENST00000617362 122 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 RMST_9.1-201ENST00000619945 193 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.62□□□□□ -1.83
TM4SF1P30408 AC112204.3-201ENST00000623822 332 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.62□□□□□ -1.83
TM4SF1P30408 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.62□□□□□ -1.83
TM4SF1P30408 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.62□□□□□ -1.83
TM4SF1P30408 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.62□□□□□ -1.83
TM4SF1P30408 AC092435.3-201ENST00000565538 3654 ntBASIC3.62□□□□□ -1.83
TM4SF1P30408 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
TM4SF1P30408 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TM4SF1P30408 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TM4SF1P30408 MTND5P33-201ENST00000571250 1450 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 CUL1P1-201ENST00000509510 2425 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
TM4SF1P30408 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TM4SF1P30408 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TM4SF1P30408 RPL7P26-201ENST00000333817 754 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 RNU5F-6P-201ENST00000362979 116 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 RNU5E-8P-201ENST00000363502 116 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 SNORA9.2-201ENST00000365361 133 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
TM4SF1P30408 RNU6-809P-201ENST00000384461 107 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 MIR9-1-201ENST00000385198 89 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 MIR493-201ENST00000385254 89 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 RNU6-278P-201ENST00000390945 109 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 AL109755.1-201ENST00000401791 649 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 RPL17P12-201ENST00000413391 526 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 AC008850.1-201ENST00000427546 362 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 LARP1BP3-201ENST00000437229 869 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 HMGN2P20-201ENST00000437531 273 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 FTH1P1-201ENST00000437933 532 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.61□□□□□ -1.83
TM4SF1P30408 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.61□□□□□ -1.83
TM4SF1P30408 AL162389.1-201ENST00000449233 177 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 AC108059.3-201ENST00000456388 214 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 AL136097.1-201ENST00000456945 913 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 BET1P1-201ENST00000482276 359 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 RPS6P4-201ENST00000494693 758 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TM4SF1P30408 AC112204.1-201ENST00000502591 103 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 SNORA70.16-201ENST00000516390 95 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.61□□□□□ -1.83
TM4SF1P30408 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.61□□□□□ -1.83
TM4SF1P30408 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.61□□□□□ -1.83
TM4SF1P30408 AC091489.2-201ENST00000566263 604 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 AC011260.1-201ENST00000578420 472 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 AC008507.1-201ENST00000587506 734 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 UBE2L4-201ENST00000587688 464 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 AL359999.1-201ENST00000604513 294 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 AC007038.2-201ENST00000608095 740 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 AC004832.5-201ENST00000608677 401 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TM4SF1P30408 AC090970.3-201ENST00000612566 866 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 AL158801.5-201ENST00000623123 465 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 AC007494.3-201ENST00000624660 743 ntBASIC3.61□□□□□ -1.83
TM4SF1P30408 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TM4SF1P30408 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TM4SF1P30408 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.61□□□□□ -1.83
TM4SF1P30408 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TM4SF1P30408 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TM4SF1P30408 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TM4SF1P30408 PABPC1P9-201ENST00000426076 1612 ntBASIC3.6□□□□□ -1.83
TM4SF1P30408 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TM4SF1P30408 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
TM4SF1P30408 Y_RNA.97-201ENST00000363094 102 ntBASIC3.6□□□□□ -1.83
TM4SF1P30408 SKINT1L-201ENST00000401057 817 ntBASIC3.6□□□□□ -1.83
TM4SF1P30408 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TM4SF1P30408 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.6□□□□□ -1.83
TM4SF1P30408 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.6□□□□□ -1.83
TM4SF1P30408 AL513328.1-201ENST00000446460 224 ntBASIC3.6□□□□□ -1.83
TM4SF1P30408 AP000936.2-201ENST00000447151 681 ntBASIC3.6□□□□□ -1.83
TM4SF1P30408 NIPA2P5-201ENST00000452282 464 ntBASIC3.6□□□□□ -1.83
TM4SF1P30408 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.6□□□□□ -1.83
TM4SF1P30408 SNRPFP4-201ENST00000456366 242 ntBASIC3.6□□□□□ -1.83
TM4SF1P30408 MTCO1P42-201ENST00000457379 726 ntBASIC3.6□□□□□ -1.83
TM4SF1P30408 AC006445.2-201ENST00000510061 472 ntBASIC3.6□□□□□ -1.83
TM4SF1P30408 RN7SKP60-201ENST00000516985 239 ntBASIC3.6□□□□□ -1.83
TM4SF1P30408 AC025881.1-201ENST00000518851 512 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms