Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATP2B4P23634 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ATP2B4P23634 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
ATP2B4P23634 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
ATP2B4P23634 DHX9P1-201ENST00000436565 3076 ntBASIC5.51□□□□□ -1.53
ATP2B4P23634 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
ATP2B4P23634 Y_RNA.252-201ENST00000364556 101 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 Y_RNA.463-201ENST00000384271 102 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 RNA5SP187-201ENST00000384400 119 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 RPL21P90-201ENST00000415692 466 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.5□□□□□ -1.53
ATP2B4P23634 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.5□□□□□ -1.53
ATP2B4P23634 IPO7P1-201ENST00000442031 636 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 RNU7-138P-201ENST00000459479 64 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.5□□□□□ -1.53
ATP2B4P23634 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC5.5□□□□□ -1.53
ATP2B4P23634 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.5□□□□□ -1.53
ATP2B4P23634 PARP4P3-201ENST00000510265 317 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 MIR2116-201ENST00000517221 80 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 AC134698.5-201ENST00000519444 336 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 VN1R85P-201ENST00000601587 426 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 AC113403.1-201ENST00000604910 193 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 HMGN2P28-201ENST00000606102 262 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 AC002044.1-201ENST00000606707 158 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.5□□□□□ -1.53
ATP2B4P23634 AC011755.1-201ENST00000623763 2049 ntBASIC5.5□□□□□ -1.53
ATP2B4P23634 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATP2B4P23634 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
ATP2B4P23634 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
ATP2B4P23634 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATP2B4P23634 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.49□□□□□ -1.53
ATP2B4P23634 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
ATP2B4P23634 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
ATP2B4P23634 MTND5P30-201ENST00000452896 1731 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.49□□□□□ -1.53
ATP2B4P23634 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATP2B4P23634 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATP2B4P23634 RNU6-371P-201ENST00000364283 108 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 UBBP2-201ENST00000376781 231 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 Y_RNA.404-201ENST00000383978 102 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 AC097374.1-203ENST00000400783 485 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 MRPL42P3-201ENST00000401492 326 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 Z99755.1-201ENST00000414048 380 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.49□□□□□ -1.53
ATP2B4P23634 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.49□□□□□ -1.53
ATP2B4P23634 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.49□□□□□ -1.53
ATP2B4P23634 SNRPEP4-201ENST00000435815 279 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.49□□□□□ -1.53
ATP2B4P23634 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.49□□□□□ -1.53
ATP2B4P23634 RPL21P23-201ENST00000446654 460 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 RPL23AP2-201ENST00000471227 466 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 AC084198.1-201ENST00000477747 402 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.49□□□□□ -1.53
ATP2B4P23634 Y_RNA.661-201ENST00000516003 99 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 RNU6-1137P-201ENST00000517073 99 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 AL117187.1-201ENST00000555482 181 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 BNIP3P16-201ENST00000589779 534 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 uc_338.13-201ENST00000618243 179 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 AC138305.3-201ENST00000624988 240 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATP2B4P23634 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATP2B4P23634 PNPT1P2-201ENST00000456768 2050 ntBASIC5.49□□□□□ -1.53
ATP2B4P23634 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
ATP2B4P23634 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
ATP2B4P23634 SDAD1P2-201ENST00000441308 2028 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2B4P23634 OR51H2P-202ENST00000641424 3046 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2B4P23634 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
ATP2B4P23634 AC104118.1-201ENST00000607625 1589 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 RNU6-173P-201ENST00000364215 104 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 RNU1-132P-201ENST00000364300 164 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
ATP2B4P23634 RNU6-985P-201ENST00000410182 104 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 RN7SKP27-201ENST00000410684 333 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 UBE2V1P4-201ENST00000425374 344 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.48□□□□□ -1.53
ATP2B4P23634 AC073063.1-201ENST00000434352 607 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.48□□□□□ -1.53
ATP2B4P23634 AC012671.1-201ENST00000451912 203 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 SNORD5.1-201ENST00000458800 75 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 HSPE1P6-201ENST00000479457 291 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 AC009901.1-201ENST00000506703 541 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2B4P23634 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.48□□□□□ -1.53
ATP2B4P23634 AC074050.1-201ENST00000563247 211 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 AC010653.1-201ENST00000571108 881 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2B4P23634 SNORD91B-202ENST00000608459 222 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 AL161423.1-201ENST00000613700 262 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 AC034102.8-201ENST00000615146 484 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 MIR6891-201ENST00000618788 93 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
ATP2B4P23634 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
ATP2B4P23634 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.48□□□□□ -1.53
ATP2B4P23634 AP000542.2-201ENST00000623199 6179 ntBASIC5.48□□□□□ -1.53
ATP2B4P23634 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms