Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TNFSF4P23510 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TNFSF4P23510 FTLP6-201ENST00000355274 422 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 SNORA62-201ENST00000365493 153 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 RNA5SP151-201ENST00000365632 117 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 Y_RNA.381-201ENST00000365666 102 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 RNU6-483P-201ENST00000384088 108 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 Y_RNA.573-201ENST00000384763 105 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 MIR141-201ENST00000384975 95 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 RNU6-550P-201ENST00000391057 101 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 U3.22-201ENST00000391120 215 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 MIR1911-201ENST00000410783 80 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFSF4P23510 AL161631.1-201ENST00000417933 486 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 AL160275.3-201ENST00000423876 471 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 RPL23AP82-202ENST00000427528 469 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.68□□□□□ -1.82
TNFSF4P23510 SEPT14P3-201ENST00000439401 183 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFSF4P23510 AL732372.2-207ENST00000445840 183 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 SEPT14P2-201ENST00000453405 183 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 CACYBPP2-201ENST00000453625 678 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.68□□□□□ -1.82
TNFSF4P23510 U3.44-201ENST00000458938 192 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 AC109327.1-201ENST00000471666 403 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 AC092436.1-201ENST00000506450 503 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 SEPT14P4-201ENST00000513445 186 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 RNA5SP165-201ENST00000517142 115 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 FO082796.1-201ENST00000523795 183 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 TVP23BP1-201ENST00000557500 617 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.68□□□□□ -1.82
TNFSF4P23510 SLC25A36P1-201ENST00000590111 465 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 MIR7154-201ENST00000620673 73 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 AC099506.2-201ENST00000623074 221 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 AC073308.1-201ENST00000623696 305 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TNFSF4P23510 AC091152.2-201ENST00000591628 2569 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
TNFSF4P23510 CKAP2P1-201ENST00000555477 2049 ntBASIC3.68□□□□□ -1.82
TNFSF4P23510 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.67□□□□□ -1.82
TNFSF4P23510 MTND4P14-201ENST00000435799 1354 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TNFSF4P23510 RNU6-552P-201ENST00000362869 119 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 SNORA69-201ENST00000383895 132 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
TNFSF4P23510 PTMAP5-201ENST00000393073 333 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 Y_RNA.625-201ENST00000411256 107 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 JKAMPP1-201ENST00000413804 919 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 AC007390.1-201ENST00000415722 356 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFSF4P23510 MTCO1P20-201ENST00000425366 358 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 C4BPAP2-201ENST00000428434 478 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFSF4P23510 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFSF4P23510 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFSF4P23510 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.67□□□□□ -1.82
TNFSF4P23510 AC114755.5-201ENST00000447760 831 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 AC009220.1-201ENST00000451614 275 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFSF4P23510 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFSF4P23510 RPL23AP81-201ENST00000455252 467 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 MTAPP1-201ENST00000489154 819 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFSF4P23510 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFSF4P23510 PCBP2P3-201ENST00000509726 843 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TNFSF4P23510 RNU6-928P-201ENST00000516876 104 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFSF4P23510 AP003122.3-201ENST00000526316 255 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 PHBP17-201ENST00000528576 541 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 AC084851.1-201ENST00000529105 249 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 AP005435.4-201ENST00000529514 284 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFSF4P23510 MIR1273C-201ENST00000578669 77 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFSF4P23510 DUSP12P1-201ENST00000612874 516 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFSF4P23510 AL160394.1-201ENST00000624765 724 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.67□□□□□ -1.82
TNFSF4P23510 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
TNFSF4P23510 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFSF4P23510 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFSF4P23510 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
TNFSF4P23510 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
TNFSF4P23510 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFSF4P23510 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFSF4P23510 RNU6-116P-201ENST00000384042 109 ntBASIC3.66□□□□□ -1.82
TNFSF4P23510 MIR591-201ENST00000385290 95 ntBASIC3.66□□□□□ -1.82
TNFSF4P23510 RNU6-903P-201ENST00000391270 109 ntBASIC3.66□□□□□ -1.82
TNFSF4P23510 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFSF4P23510 MIR888-201ENST00000401186 77 ntBASIC3.66□□□□□ -1.82
TNFSF4P23510 BTF3P7-201ENST00000407097 488 ntBASIC3.66□□□□□ -1.82
TNFSF4P23510 MIR1179-201ENST00000408703 91 ntBASIC3.66□□□□□ -1.82
TNFSF4P23510 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFSF4P23510 MTCYBP8-201ENST00000422855 651 ntBASIC3.66□□□□□ -1.82
TNFSF4P23510 RPL7P28-201ENST00000437739 740 ntBASIC3.66□□□□□ -1.82
TNFSF4P23510 RPL23AP52-201ENST00000439311 478 ntBASIC3.66□□□□□ -1.82
TNFSF4P23510 AC092473.1-201ENST00000441098 221 ntBASIC3.66□□□□□ -1.82
TNFSF4P23510 AL118520.1-201ENST00000450770 291 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms