Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LMNB1P20700 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.23□□□□□ -1.57
LMNB1P20700 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LMNB1P20700 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.22□□□□□ -1.57
LMNB1P20700 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LMNB1P20700 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LMNB1P20700 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LMNB1P20700 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LMNB1P20700 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LMNB1P20700 AC027287.1-201ENST00000553115 1453 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LMNB1P20700 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LMNB1P20700 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.22□□□□□ -1.57
LMNB1P20700 AL133412.1-201ENST00000380194 2992 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 RNU6-1160P-201ENST00000384546 104 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 MIR34B-201ENST00000385076 84 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 AL080315.1-201ENST00000406055 466 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 RN7SKP158-201ENST00000410453 326 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 RPS20P14-201ENST00000412545 360 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 RPL30P2-201ENST00000414021 291 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 AC005517.2-201ENST00000424673 553 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.22□□□□□ -1.57
LMNB1P20700 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.22□□□□□ -1.57
LMNB1P20700 AL162388.1-201ENST00000450912 352 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 MRPS31P2-201ENST00000451581 518 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 HMGB3P21-201ENST00000452483 547 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 RNU6-566P-201ENST00000516790 107 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.22□□□□□ -1.57
LMNB1P20700 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.22□□□□□ -1.57
LMNB1P20700 OR11H5P-201ENST00000554039 926 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.22□□□□□ -1.57
LMNB1P20700 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LMNB1P20700 AC008521.1-201ENST00000587471 187 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 AC012669.1-201ENST00000603209 283 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 AC092747.3-201ENST00000603769 301 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 AC104662.1-201ENST00000604448 511 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 AL355802.3-201ENST00000607571 545 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 TUG1_2.1-201ENST00000614234 87 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 AL391261.4-201ENST00000616012 481 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 AL354798.1-201ENST00000622505 329 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 AC009093.8-201ENST00000641769 292 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.22□□□□□ -1.57
LMNB1P20700 TPTE2P4-201ENST00000258589 1605 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LMNB1P20700 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
LMNB1P20700 EXOC5P1-201ENST00000510543 1969 ntBASIC5.22□□□□□ -1.57
LMNB1P20700 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LMNB1P20700 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
LMNB1P20700 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.21□□□□□ -1.57
LMNB1P20700 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LMNB1P20700 AC073346.2-201ENST00000624724 2058 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.21□□□□□ -1.58
LMNB1P20700 Y_RNA.31-201ENST00000362574 102 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 RNU6-1013P-201ENST00000384180 107 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 AL592291.1-201ENST00000403830 352 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 RNU6-370P-201ENST00000411008 104 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 POLHP1-201ENST00000411806 470 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.21□□□□□ -1.58
LMNB1P20700 PSMA2P3-201ENST00000429685 675 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.21□□□□□ -1.58
LMNB1P20700 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.21□□□□□ -1.58
LMNB1P20700 SNORA59A-201ENST00000459326 152 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.21□□□□□ -1.58
LMNB1P20700 AL163540.1-201ENST00000485382 386 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 RN7SKP234-201ENST00000517173 224 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.21□□□□□ -1.58
LMNB1P20700 AL121576.1-201ENST00000556055 276 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 AC006270.2-201ENST00000578523 652 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 AC006504.6-201ENST00000590142 199 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 AC005255.1-201ENST00000593748 216 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 AL031176.1-201ENST00000604554 466 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
LMNB1P20700 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LMNB1P20700 MTCO1P12-201ENST00000414273 1543 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LMNB1P20700 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LMNB1P20700 AC007823.1-201ENST00000569932 1566 ntBASIC5.21□□□□□ -1.58
LMNB1P20700 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LMNB1P20700 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LMNB1P20700 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMNB1P20700 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMNB1P20700 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LMNB1P20700 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LMNB1P20700 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LMNB1P20700 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.2□□□□□ -1.58
LMNB1P20700 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
LMNB1P20700 AC018529.3-201ENST00000624212 2254 ntBASIC5.2□□□□□ -1.58
LMNB1P20700 Y_RNA.146-201ENST00000363549 102 ntBASIC5.2□□□□□ -1.58
LMNB1P20700 RNU6-1284P-201ENST00000363701 100 ntBASIC5.2□□□□□ -1.58
LMNB1P20700 SNORA33.2-201ENST00000365413 134 ntBASIC5.2□□□□□ -1.58
LMNB1P20700 RNU6-1127P-201ENST00000384580 107 ntBASIC5.2□□□□□ -1.58
LMNB1P20700 MIR135A2-201ENST00000384854 100 ntBASIC5.2□□□□□ -1.58
LMNB1P20700 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.2□□□□□ -1.58
LMNB1P20700 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.2□□□□□ -1.58
LMNB1P20700 RPS15AP27-201ENST00000449183 343 ntBASIC5.2□□□□□ -1.58
LMNB1P20700 AL162389.1-201ENST00000449233 177 ntBASIC5.2□□□□□ -1.58
LMNB1P20700 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.2□□□□□ -1.58
LMNB1P20700 AC107399.1-201ENST00000451226 265 ntBASIC5.2□□□□□ -1.58
LMNB1P20700 RPL23AP81-201ENST00000455252 467 ntBASIC5.2□□□□□ -1.58
LMNB1P20700 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms