Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HLA-DPA1P20036 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DPA1P20036 RN7SKP58-201ENST00000411010 305 ntBASIC2.98□□□□□ -1.93
HLA-DPA1P20036 RPL7P8-201ENST00000411964 730 ntBASIC2.98□□□□□ -1.93
HLA-DPA1P20036 RPL7P10-201ENST00000417407 739 ntBASIC2.98□□□□□ -1.93
HLA-DPA1P20036 BTF3L4P3-201ENST00000418879 476 ntBASIC2.98□□□□□ -1.93
HLA-DPA1P20036 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DPA1P20036 AC098614.2-201ENST00000426040 255 ntBASIC2.98□□□□□ -1.93
HLA-DPA1P20036 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DPA1P20036 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DPA1P20036 ELOCP30-201ENST00000447108 299 ntBASIC2.98□□□□□ -1.93
HLA-DPA1P20036 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DPA1P20036 RPL26P9-201ENST00000457466 433 ntBASIC2.98□□□□□ -1.93
HLA-DPA1P20036 AC010631.1-201ENST00000474150 156 ntBASIC2.98□□□□□ -1.93
HLA-DPA1P20036 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DPA1P20036 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
HLA-DPA1P20036 AC009812.2-201ENST00000517657 457 ntBASIC2.98□□□□□ -1.93
HLA-DPA1P20036 AC022634.1-201ENST00000520765 532 ntBASIC2.98□□□□□ -1.93
HLA-DPA1P20036 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DPA1P20036 AP000857.1-201ENST00000532151 543 ntBASIC2.98□□□□□ -1.93
HLA-DPA1P20036 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.98□□□□□ -1.93
HLA-DPA1P20036 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DPA1P20036 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.98□□□□□ -1.93
HLA-DPA1P20036 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.98□□□□□ -1.93
HLA-DPA1P20036 AC011471.1-201ENST00000585766 187 ntBASIC2.98□□□□□ -1.93
HLA-DPA1P20036 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.98□□□□□ -1.93
HLA-DPA1P20036 AC007349.4-201ENST00000608114 532 ntBASIC2.98□□□□□ -1.93
HLA-DPA1P20036 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.98□□□□□ -1.93
HLA-DPA1P20036 AC000403.1-201ENST00000613696 3585 ntBASIC2.98□□□□□ -1.93
HLA-DPA1P20036 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.98□□□□□ -1.93
HLA-DPA1P20036 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
HLA-DPA1P20036 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DPA1P20036 PABPC1P9-201ENST00000426076 1612 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 SNORA9.2-201ENST00000365361 133 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 MIR23A-201ENST00000385245 73 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 MIR888-201ENST00000401186 77 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 MIR887-201ENST00000401258 79 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 AL122016.1-201ENST00000403365 367 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 CCNG1P1-201ENST00000406783 885 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 MIR1305-201ENST00000408300 86 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 AC096664.2-201ENST00000411843 406 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 USP9YP13-201ENST00000417797 480 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DPA1P20036 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DPA1P20036 AL445669.1-201ENST00000426743 755 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 SDR42E1P3-201ENST00000438345 502 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DPA1P20036 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DPA1P20036 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DPA1P20036 RPL36AP51-201ENST00000487216 318 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 RPS29P20-201ENST00000489592 171 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 POU5F1P7-201ENST00000508759 541 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 LTV1P1-201ENST00000510683 1237 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 MTND5P13-201ENST00000513046 1079 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 RNA5SP290-201ENST00000517133 127 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DPA1P20036 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 MTND4P33-201ENST00000556706 766 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DPA1P20036 AC007038.2-201ENST00000608095 740 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 AL161734.1-201ENST00000609720 557 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 AC097655.1-201ENST00000635075 318 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 AC092125.1-201ENST00000562568 1995 ntBASIC2.97□□□□□ -1.93
HLA-DPA1P20036 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DPA1P20036 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HLA-DPA1P20036 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.96□□□□□ -1.93
HLA-DPA1P20036 RNU1-140P-201ENST00000365040 165 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 RNU6-157P-201ENST00000383957 107 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 RNU6-851P-201ENST00000384565 107 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 MIR19A-201ENST00000384878 82 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.96□□□□□ -1.94
HLA-DPA1P20036 RNA5SP492-201ENST00000411330 114 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 USP9YP26-201ENST00000421008 661 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DPA1P20036 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DPA1P20036 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DPA1P20036 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DPA1P20036 RNU7-59P-201ENST00000459101 61 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 AC091951.3-201ENST00000504093 246 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 AC105185.1-201ENST00000518705 535 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.96□□□□□ -1.94
HLA-DPA1P20036 AC022080.3-201ENST00000544433 482 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 AC007115.1-201ENST00000546853 234 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 AC123904.3-201ENST00000547218 814 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DPA1P20036 DUXAP1-201ENST00000556632 463 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DPA1P20036 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DPA1P20036 AC136618.2-201ENST00000575091 400 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DPA1P20036 BNIP3P23-201ENST00000599655 511 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DPA1P20036 ATP5A1P2-202ENST00000616464 443 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 AC006927.4-201ENST00000639187 543 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 MTND5P19-201ENST00000424872 1794 ntBASIC2.96□□□□□ -1.94
HLA-DPA1P20036 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms