Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.95□□□□□ -2.1
CTLA4P16410 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.95□□□□□ -2.1
CTLA4P16410 AC107222.1-201ENST00000510899 637 ntBASIC1.95□□□□□ -2.1
CTLA4P16410 RNU6-1282P-201ENST00000516735 96 ntBASIC1.95□□□□□ -2.1
CTLA4P16410 AC087808.1-201ENST00000520501 361 ntBASIC1.95□□□□□ -2.1
CTLA4P16410 AP003122.3-201ENST00000526316 255 ntBASIC1.95□□□□□ -2.1
CTLA4P16410 NDUFS5P6-201ENST00000529136 295 ntBASIC1.95□□□□□ -2.1
CTLA4P16410 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.95□□□□□ -2.1
CTLA4P16410 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.95□□□□□ -2.1
CTLA4P16410 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.95□□□□□ -2.1
CTLA4P16410 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.95□□□□□ -2.1
CTLA4P16410 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.95□□□□□ -2.1
CTLA4P16410 MIR4658-201ENST00000584344 65 ntBASIC1.95□□□□□ -2.1
CTLA4P16410 AC005498.1-201ENST00000592125 465 ntBASIC1.95□□□□□ -2.1
CTLA4P16410 AC004853.1-201ENST00000604902 698 ntBASIC1.95□□□□□ -2.1
CTLA4P16410 AL596245.1-201ENST00000618994 362 ntBASIC1.95□□□□□ -2.1
CTLA4P16410 AC093591.3-201ENST00000634516 308 ntBASIC1.95□□□□□ -2.1
CTLA4P16410 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.95□□□□□ -2.1
CTLA4P16410 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CTLA4P16410 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CTLA4P16410 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
CTLA4P16410 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CTLA4P16410 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
CTLA4P16410 RPS4XP7-201ENST00000406274 780 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 RPS3AP24-201ENST00000407896 734 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 Z85995.1-201ENST00000415547 335 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 USP9YP21-201ENST00000420603 432 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 AC099548.1-201ENST00000421443 426 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.94□□□□□ -2.1
CTLA4P16410 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.94□□□□□ -2.1
CTLA4P16410 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.94□□□□□ -2.1
CTLA4P16410 C1DP1-201ENST00000426049 402 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 GTF2IP20-201ENST00000431663 360 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 USP9YP22-201ENST00000438971 294 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 NDUFAF4P2-201ENST00000445374 520 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.94□□□□□ -2.1
CTLA4P16410 HIGD1AP2-201ENST00000446367 280 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 COX6CP12-201ENST00000446748 202 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 RPL23AP49-201ENST00000492925 468 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 TMEM251P1-201ENST00000503717 318 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.94□□□□□ -2.1
CTLA4P16410 MTCYBP16-201ENST00000509187 1129 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 NDUFB4P2-201ENST00000509515 391 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 HMGB3P3-201ENST00000510526 400 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CTLA4P16410 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.94□□□□□ -2.1
CTLA4P16410 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.94□□□□□ -2.1
CTLA4P16410 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.94□□□□□ -2.1
CTLA4P16410 SNORA31.18-201ENST00000517043 134 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 ATP5F1P5-201ENST00000526403 760 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.94□□□□□ -2.1
CTLA4P16410 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.94□□□□□ -2.1
CTLA4P16410 LRRC37A5P-203ENST00000580181 585 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 MIR3616-201ENST00000584070 92 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 AC013553.2-201ENST00000604244 589 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 AL158211.2-201ENST00000607282 395 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 AC107294.1-201ENST00000609524 467 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 AC124016.2-201ENST00000610058 665 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 AC011890.2-201ENST00000613393 294 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 AC006213.4-201ENST00000616184 634 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 AC084824.4-201ENST00000620106 731 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.94□□□□□ -2.1
CTLA4P16410 MIR203B-201ENST00000636080 86 ntBASIC1.94□□□□□ -2.1
CTLA4P16410 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CTLA4P16410 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CTLA4P16410 AP005901.5-201ENST00000545779 1796 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
CTLA4P16410 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CTLA4P16410 RN7SKP226-201ENST00000364912 300 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.93□□□□□ -2.1
CTLA4P16410 RNU6-76P-201ENST00000384060 104 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CTLA4P16410 UBE2V1P2-201ENST00000397758 440 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 BTF3P7-201ENST00000407097 488 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.93□□□□□ -2.1
CTLA4P16410 SPA17P1-201ENST00000416656 452 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 CCDC58P2-201ENST00000417131 366 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 AL590383.1-201ENST00000428602 75 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 AL356867.1-201ENST00000429623 299 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 AL512844.2-201ENST00000433990 593 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.93□□□□□ -2.1
CTLA4P16410 THAP5P1-201ENST00000439089 262 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 MTND2P20-201ENST00000440805 661 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.93□□□□□ -2.1
CTLA4P16410 DPPA3P1-201ENST00000448050 469 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
CTLA4P16410 AC092902.1-201ENST00000486999 259 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.93□□□□□ -2.1
CTLA4P16410 AC114981.1-201ENST00000503897 678 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
CTLA4P16410 RNA5SP200-201ENST00000516360 103 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 RNU6-1028P-201ENST00000517164 93 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CTLA4P16410 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.93□□□□□ -2.1
CTLA4P16410 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.93□□□□□ -2.1
CTLA4P16410 AC022861.1-201ENST00000522981 663 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 SUB1P1-201ENST00000524415 382 ntBASIC1.93□□□□□ -2.1
CTLA4P16410 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.93□□□□□ -2.1
CTLA4P16410 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.93□□□□□ -2.1
CTLA4P16410 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms