Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 MIR3660-201ENST00000584845 100 ntBASIC1.22□□□□□ -2.21
TPRP12270 AC005498.1-201ENST00000592125 465 ntBASIC1.22□□□□□ -2.21
TPRP12270 AC010809.3-201ENST00000621310 641 ntBASIC1.22□□□□□ -2.21
TPRP12270 AC130650.2-201ENST00000618736 2403 ntBASIC1.22□□□□□ -2.21
TPRP12270 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.22□□□□□ -2.21
TPRP12270 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
TPRP12270 AC018630.2-201ENST00000534866 2403 ntBASIC1.22□□□□□ -2.21
TPRP12270 RNA5SP331-201ENST00000364986 107 ntBASIC1.22□□□□□ -2.21
TPRP12270 MIR1197-201ENST00000408818 88 ntBASIC1.22□□□□□ -2.21
TPRP12270 RPL21P131-201ENST00000497298 483 ntBASIC1.22□□□□□ -2.21
TPRP12270 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.22□□□□□ -2.21
TPRP12270 AC025755.1-201ENST00000521306 278 ntBASIC1.22□□□□□ -2.21
TPRP12270 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.22□□□□□ -2.21
TPRP12270 NOP56P3-201ENST00000549457 385 ntBASIC1.22□□□□□ -2.21
TPRP12270 SETP2-201ENST00000553886 926 ntBASIC1.22□□□□□ -2.21
TPRP12270 HSPE1P3-201ENST00000559254 309 ntBASIC1.22□□□□□ -2.21
TPRP12270 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.22□□□□□ -2.21
TPRP12270 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.21□□□□□ -2.21
TPRP12270 ANAPC10P1-201ENST00000395991 556 ntBASIC1.21□□□□□ -2.22
TPRP12270 SNORA81-201ENST00000408493 178 ntBASIC1.21□□□□□ -2.22
TPRP12270 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.21□□□□□ -2.22
TPRP12270 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.21□□□□□ -2.22
TPRP12270 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.21□□□□□ -2.22
TPRP12270 AL596276.1-201ENST00000434465 418 ntBASIC1.21□□□□□ -2.22
TPRP12270 RPS29P29-201ENST00000456396 171 ntBASIC1.21□□□□□ -2.22
TPRP12270 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.21□□□□□ -2.22
TPRP12270 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.21□□□□□ -2.22
TPRP12270 AC009901.1-201ENST00000506703 541 ntBASIC1.21□□□□□ -2.22
TPRP12270 AF279873.1-201ENST00000523393 313 ntBASIC1.21□□□□□ -2.22
TPRP12270 OR4V1P-201ENST00000525394 1140 ntBASIC1.21□□□□□ -2.22
TPRP12270 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
TPRP12270 MIR6513-201ENST00000621188 64 ntBASIC1.21□□□□□ -2.22
TPRP12270 AL356118.1-201ENST00000635272 1078 ntBASIC1.21□□□□□ -2.22
TPRP12270 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
TPRP12270 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
TPRP12270 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC1.21□□□□□ -2.22
TPRP12270 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.21□□□□□ -2.22
TPRP12270 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC1.21□□□□□ -2.22
TPRP12270 AP005435.4-201ENST00000529514 284 ntBASIC1.21□□□□□ -2.22
TPRP12270 AL132857.1-201ENST00000555180 708 ntBASIC1.21□□□□□ -2.22
TPRP12270 AC024619.4-201ENST00000580924 316 ntBASIC1.21□□□□□ -2.22
TPRP12270 DUXAP11-201ENST00000603858 526 ntBASIC1.21□□□□□ -2.22
TPRP12270 Y_RNA.549-201ENST00000384657 102 ntBASIC1.2□□□□□ -2.22
TPRP12270 CYCSP33-201ENST00000414485 327 ntBASIC1.2□□□□□ -2.22
TPRP12270 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC1.2□□□□□ -2.22
TPRP12270 AC004022.1-201ENST00000447766 1066 ntBASIC1.2□□□□□ -2.22
TPRP12270 AC006499.2-201ENST00000513470 337 ntBASIC1.2□□□□□ -2.22
TPRP12270 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.2□□□□□ -2.22
TPRP12270 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.2□□□□□ -2.22
TPRP12270 GLUD1P4-201ENST00000590914 418 ntBASIC1.2□□□□□ -2.22
TPRP12270 AC112503.2-201ENST00000609005 552 ntBASIC1.2□□□□□ -2.22
TPRP12270 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
TPRP12270 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.2□□□□□ -2.22
TPRP12270 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TPRP12270 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
TPRP12270 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.2□□□□□ -2.22
TPRP12270 RNU6-997P-201ENST00000384725 107 ntBASIC1.2□□□□□ -2.22
TPRP12270 AL445669.1-201ENST00000426743 755 ntBASIC1.2□□□□□ -2.22
TPRP12270 Z96811.1-201ENST00000445880 108 ntBASIC1.2□□□□□ -2.22
TPRP12270 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TPRP12270 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.2□□□□□ -2.22
TPRP12270 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.2□□□□□ -2.22
TPRP12270 SNORD39.2-201ENST00000579995 76 ntBASIC1.2□□□□□ -2.22
TPRP12270 DUXAP4-201ENST00000603046 613 ntBASIC1.2□□□□□ -2.22
TPRP12270 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.2□□□□□ -2.22
TPRP12270 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.2□□□□□ -2.22
TPRP12270 RNU6-225P-201ENST00000384613 103 ntBASIC1.19□□□□□ -2.22
TPRP12270 AC109780.2-201ENST00000413467 845 ntBASIC1.19□□□□□ -2.22
TPRP12270 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.19□□□□□ -2.22
TPRP12270 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC1.19□□□□□ -2.22
TPRP12270 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.19□□□□□ -2.22
TPRP12270 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.19□□□□□ -2.22
TPRP12270 SNORD59.2-201ENST00000516873 68 ntBASIC1.19□□□□□ -2.22
TPRP12270 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.19□□□□□ -2.22
TPRP12270 AL049838.1-201ENST00000563647 981 ntBASIC1.19□□□□□ -2.22
TPRP12270 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TPRP12270 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.19□□□□□ -2.22
TPRP12270 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.19□□□□□ -2.22
TPRP12270 AC138915.1-201ENST00000565427 1685 ntBASIC1.19□□□□□ -2.22
TPRP12270 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TPRP12270 AC010627.1-201ENST00000503819 1294 ntBASIC1.19□□□□□ -2.22
TPRP12270 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.19□□□□□ -2.22
TPRP12270 AC005034.5-201ENST00000604219 466 ntBASIC1.19□□□□□ -2.22
TPRP12270 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TPRP12270 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
TPRP12270 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.18□□□□□ -2.22
TPRP12270 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TPRP12270 SNORD114-23-201ENST00000363536 72 ntBASIC1.18□□□□□ -2.22
TPRP12270 MTND1P23-201ENST00000416931 372 ntBASIC1.18□□□□□ -2.22
TPRP12270 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.18□□□□□ -2.22
TPRP12270 AC016691.1-201ENST00000441321 413 ntBASIC1.18□□□□□ -2.22
TPRP12270 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.18□□□□□ -2.22
TPRP12270 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
TPRP12270 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.18□□□□□ -2.22
TPRP12270 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.18□□□□□ -2.22
TPRP12270 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.18□□□□□ -2.22
TPRP12270 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
TPRP12270 MTND5P9-201ENST00000503854 1755 ntBASIC1.18□□□□□ -2.22
TPRP12270 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.18□□□□□ -2.22
TPRP12270 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms