Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 MIR369-201ENST00000362155 70 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 RNU6-1252P-201ENST00000363054 104 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 SNORA63C-201ENST00000364578 129 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 RNU6-434P-201ENST00000384376 107 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 Y_RNA.482-201ENST00000384377 111 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 RNU6-393P-201ENST00000384475 107 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COL6A2P12110 RNA5SP219-201ENST00000390940 113 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 SNORA16.2-201ENST00000390991 127 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 RNU6-882P-201ENST00000391025 103 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 SNORA75.4-201ENST00000391278 119 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 AL139397.2-201ENST00000404529 772 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 RPL23AP48-201ENST00000406913 488 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 ATG3P1-201ENST00000419507 911 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
COL6A2P12110 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.41□□□□□ -1.7
COL6A2P12110 NEFMP1-201ENST00000443423 1006 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 AL451050.1-201ENST00000450126 415 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 RPS11P1-201ENST00000451072 473 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.41□□□□□ -1.7
COL6A2P12110 FABP5P13-201ENST00000452144 328 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.41□□□□□ -1.7
COL6A2P12110 RPS3AP41-201ENST00000462701 778 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 DYNLL1P5-201ENST00000467158 270 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 RPL23AP2-201ENST00000471227 466 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 RPS27AP13-201ENST00000498403 237 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.41□□□□□ -1.7
COL6A2P12110 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.41□□□□□ -1.7
COL6A2P12110 RN7SKP60-201ENST00000516985 239 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 Y_RNA.711-201ENST00000516993 102 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 SNORA31.22-201ENST00000517204 135 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 IGKV1-32-201ENST00000519290 311 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 RANP9-201ENST00000519957 271 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.41□□□□□ -1.7
COL6A2P12110 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.41□□□□□ -1.7
COL6A2P12110 COPS8P3-201ENST00000526024 482 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.41□□□□□ -1.7
COL6A2P12110 AL121603.1-201ENST00000553815 142 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.41□□□□□ -1.7
COL6A2P12110 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.41□□□□□ -1.7
COL6A2P12110 CYP4A43P-201ENST00000568156 121 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 MIR3941-201ENST00000582572 103 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COL6A2P12110 Z98200.1-201ENST00000607298 470 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 FAM25E-202ENST00000608562 189 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 U2.17-201ENST00000611454 95 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 AL138726.1-201ENST00000614873 333 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 AL353748.2-201ENST00000622148 471 ntBASIC4.41□□□□□ -1.7
COL6A2P12110 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
COL6A2P12110 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL6A2P12110 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL6A2P12110 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL6A2P12110 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.41□□□□□ -1.7
COL6A2P12110 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
COL6A2P12110 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL6A2P12110 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL6A2P12110 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.41□□□□□ -1.7
COL6A2P12110 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
COL6A2P12110 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
COL6A2P12110 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
COL6A2P12110 Y_RNA.197-201ENST00000364004 102 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL6A2P12110 RNU6-76P-201ENST00000384060 104 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 MIR450B-201ENST00000401182 78 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 RPL26P29-201ENST00000415623 438 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.4□□□□□ -1.71
COL6A2P12110 SKA2P1-201ENST00000425592 390 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.4□□□□□ -1.71
COL6A2P12110 RPL23AP69-201ENST00000431134 458 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.4□□□□□ -1.71
COL6A2P12110 AC005019.1-201ENST00000436455 431 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 RPL23AP89-201ENST00000439324 255 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 RPL23AP93-201ENST00000440847 484 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.4□□□□□ -1.71
COL6A2P12110 RNU7-167P-201ENST00000459160 62 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.4□□□□□ -1.71
COL6A2P12110 AC083982.1-201ENST00000485679 344 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 VN1R105P-201ENST00000486595 910 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.4□□□□□ -1.71
COL6A2P12110 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.4□□□□□ -1.71
COL6A2P12110 Y_RNA.689-201ENST00000516589 107 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 RNU6-273P-201ENST00000516937 96 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
COL6A2P12110 AC091042.1-201ENST00000579213 173 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 MIR4480-201ENST00000582492 71 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 AL031320.1-201ENST00000604177 357 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 DUSP12P1-201ENST00000612874 516 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 SDR42E1P2-201ENST00000614861 481 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 AC098657.3-201ENST00000620434 263 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 AC091953.3-201ENST00000623220 236 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.4□□□□□ -1.71
COL6A2P12110 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.4□□□□□ -1.71
COL6A2P12110 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
COL6A2P12110 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
COL6A2P12110 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.4□□□□□ -1.71
COL6A2P12110 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.4□□□□□ -1.71
COL6A2P12110 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
COL6A2P12110 MTCO1P12-201ENST00000414273 1543 ntBASIC4.4□□□□□ -1.71
COL6A2P12110 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms