| STAG3L3 | P0CL85 | SNORA56-201 | ENST00000383966 | 129 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AL590084.1-201 | ENST00000407885 | 387 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RNU2-72P-201 | ENST00000411175 | 163 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RNA5SP270-201 | ENST00000411361 | 118 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AL357500.1-201 | ENST00000413004 | 279 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RPL17P12-201 | ENST00000413391 | 526 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AL391704.1-203 | ENST00000414903 | 462 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | ZFY-AS1-202 | ENST00000431145 | 419 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC091133.1-201 | ENST00000435491 | 483 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | FABP5P14-201 | ENST00000437273 | 393 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AL353148.1-203 | ENST00000452286 | 665 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | NAALADL2-AS3-202 | ENST00000453180 | 413 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC117462.1-201 | ENST00000461186 | 554 nt | TSL 4 BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | Z84488.1-201 | ENST00000476099 | 530 nt | TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RN7SL293P-201 | ENST00000481765 | 281 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC068781.1-201 | ENST00000488231 | 618 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC006445.1-201 | ENST00000491925 | 405 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC093297.2-205 | ENST00000508123 | 572 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RNU1-103P-201 | ENST00000516502 | 125 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC064807.2-201 | ENST00000521188 | 672 nt | TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | DEFB131D-201 | ENST00000526803 | 184 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC087362.1-201 | ENST00000527912 | 434 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | MTCO2P15-201 | ENST00000532655 | 656 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AP000889.2-201 | ENST00000532684 | 490 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | MRPS36P5-201 | ENST00000551909 | 298 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | NDUFB1-204 | ENST00000555441 | 458 nt | APPRIS P1 TSL 3 BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | H3F3AP1-201 | ENST00000559984 | 334 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AL606834.2-201 | ENST00000602954 | 668 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AL355598.1-201 | ENST00000604169 | 202 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | YPEL5P2-201 | ENST00000605553 | 359 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | MIR4458HG-202 | ENST00000605918 | 1057 nt | TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC069200.1-201 | ENST00000609511 | 323 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC079416.3-201 | ENST00000624479 | 549 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | ABBA01000935.2-201 | ENST00000637477 | 838 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | ADAM3A-203 | ENST00000461344 | 2157 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | TMPRSS11A-201 | ENST00000334830 | 3054 nt | APPRIS P3 TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC011477.1-204 | ENST00000623416 | 1325 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | DNAH14-210 | ENST00000439375 | 13548 nt | APPRIS P1 TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RNU6-486P-201 | ENST00000363116 | 107 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RNU6-525P-201 | ENST00000363685 | 104 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RNU2-68P-201 | ENST00000410878 | 191 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RN7SKP263-201 | ENST00000411194 | 309 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AL391863.2-201 | ENST00000411838 | 681 nt | TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | BTF3L4P3-201 | ENST00000418879 | 476 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC092660.1-201 | ENST00000420648 | 371 nt | TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC093106.2-201 | ENST00000428212 | 385 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC004691.1-201 | ENST00000440376 | 547 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AL078587.1-201 | ENST00000448580 | 542 nt | TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | CECR9-201 | ENST00000453421 | 199 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | GRM7-AS3-208 | ENST00000455623 | 947 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | TSPY5P-202 | ENST00000456541 | 142 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RPS15AP36-201 | ENST00000492022 | 382 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | LINC02201-201 | ENST00000508992 | 468 nt | TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC024589.1-201 | ENST00000512207 | 263 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | TBCAP3-201 | ENST00000512475 | 312 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RNY4P37-201 | ENST00000516225 | 96 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RNU6-150P-201 | ENST00000516237 | 95 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC012379.1-201 | ENST00000558304 | 406 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC012229.1-201 | ENST00000558699 | 499 nt | TSL 4 BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC021739.1-201 | ENST00000559631 | 174 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC106782.4-201 | ENST00000568264 | 210 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC024270.4-201 | ENST00000570202 | 421 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC044840.1-201 | ENST00000577641 | 472 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | LINC01905-206 | ENST00000593180 | 524 nt | TSL 2 BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RPP40P2-201 | ENST00000603596 | 712 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | BX664608.1-201 | ENST00000610519 | 487 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | U4atac.1-201 | ENST00000618345 | 95 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AL512427.1-201 | ENST00000618593 | 349 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | SMAD5-AS1_1.1-201 | ENST00000619886 | 266 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC244517.5-202 | ENST00000623741 | 500 nt | TSL 3 BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | OR4C16-201 | ENST00000623907 | 933 nt | APPRIS P1 BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | OR1S1-201 | ENST00000624470 | 978 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AL359854.1-201 | ENST00000614203 | 1594 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | LEPR-202 | ENST00000349533 | 8227 nt | APPRIS P1 TSL 1 (best) BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | THOC2-216 | ENST00000491737 | 4452 nt | TSL 5 BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | PCF11-AS1-201 | ENST00000602322 | 1516 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | COMMD6-201 | ENST00000355801 | 486 nt | TSL 2 BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | SNORA25.6-201 | ENST00000364121 | 118 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | SNORA54-201 | ENST00000384281 | 123 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | PPP1R1C-203 | ENST00000409702 | 1157 nt | APPRIS P1 TSL 1 (best) BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AL109914.1-201 | ENST00000414740 | 146 nt | TSL 5 BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | PTP4A1P7-201 | ENST00000423476 | 514 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AL122010.1-201 | ENST00000429293 | 720 nt | TSL 2 BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | GYPB-201 | ENST00000429670 | 239 nt | TSL 1 (best) BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC010153.1-201 | ENST00000432862 | 727 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | ZNF385D-AS2-201 | ENST00000436306 | 424 nt | TSL 5 BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | GPM6BP3-201 | ENST00000442797 | 145 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC020550.1-201 | ENST00000447385 | 163 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | HMGN2P10-201 | ENST00000448085 | 265 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | PSPHP1-201 | ENST00000450062 | 261 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC055764.1-201 | ENST00000454526 | 473 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC008481.1-201 | ENST00000463278 | 396 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | DNAJC12-205 | ENST00000483798 | 769 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RPS27P21-201 | ENST00000486977 | 252 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | AC113347.3-201 | ENST00000509113 | 148 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | LINC02113-201 | ENST00000510302 | 336 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RNA5SP112-201 | ENST00000515937 | 99 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RNU6-390P-201 | ENST00000516259 | 103 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | SNORA26.10-201 | ENST00000516427 | 141 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| STAG3L3 | P0CL85 | RNA5SP165-201 | ENST00000517142 | 115 nt | BASIC | 2.18 | □□□□□ -2.06 | | |