Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.52□□□□□ -2.17
FREM3P0C091 MIR3616-201ENST00000584070 92 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 AC012254.4-201ENST00000588843 273 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.52□□□□□ -2.17
FREM3P0C091 AL670379.6-201ENST00000603753 252 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 AL670379.11-201ENST00000604059 253 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 AL670379.10-201ENST00000604330 253 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 AC008162.1-201ENST00000604718 254 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 AL670379.1-201ENST00000604752 252 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 AL670379.2-201ENST00000604983 252 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 AL670379.5-201ENST00000605253 252 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 AL670379.4-201ENST00000605279 254 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 AL670379.12-201ENST00000605291 253 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 AL670379.8-201ENST00000605353 252 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 AL670379.9-201ENST00000605428 253 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 AL670379.7-201ENST00000605823 252 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 AC025594.3-201ENST00000613068 790 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.52□□□□□ -2.17
FREM3P0C091 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
FREM3P0C091 ADAM3A-203ENST00000461344 2157 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 RNU2-40P-201ENST00000410833 196 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.51□□□□□ -2.17
FREM3P0C091 HMGN3P1-201ENST00000453847 193 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.51□□□□□ -2.17
FREM3P0C091 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
FREM3P0C091 AL359273.1-201ENST00000510918 627 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.51□□□□□ -2.17
FREM3P0C091 OR5AK1P-201ENST00000524837 922 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 GLYCAM1-201ENST00000546596 285 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 MIR4658-201ENST00000584344 65 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 AC016542.1-201ENST00000608259 493 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 AC006329.2-201ENST00000611491 394 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 OR1S1-201ENST00000624470 978 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
FREM3P0C091 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
FREM3P0C091 MIR337-201ENST00000362281 93 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 RNA5SP190-201ENST00000365222 118 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.51□□□□□ -2.17
FREM3P0C091 RNU6-921P-201ENST00000384361 107 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 RPL7L1P10-201ENST00000427790 463 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.51□□□□□ -2.17
FREM3P0C091 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.51□□□□□ -2.17
FREM3P0C091 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.51□□□□□ -2.17
FREM3P0C091 AC004865.1-201ENST00000442276 1003 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 RPS15AP34-201ENST00000487776 387 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 AC079203.1-201ENST00000487972 404 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.51□□□□□ -2.17
FREM3P0C091 AC083923.1-201ENST00000523708 376 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.51□□□□□ -2.17
FREM3P0C091 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.51□□□□□ -2.17
FREM3P0C091 MIR3609-201ENST00000582661 80 ntBASIC1.51□□□□□ -2.17
FREM3P0C091 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.51□□□□□ -2.17
FREM3P0C091 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
FREM3P0C091 TPTE2P4-201ENST00000258589 1605 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
FREM3P0C091 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.5□□□□□ -2.17
FREM3P0C091 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.5□□□□□ -2.17
FREM3P0C091 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.5□□□□□ -2.17
FREM3P0C091 AL121871.1-201ENST00000443413 436 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.5□□□□□ -2.17
FREM3P0C091 AC104564.1-201ENST00000493028 407 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 MTCYBP17-201ENST00000503579 789 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.5□□□□□ -2.17
FREM3P0C091 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
FREM3P0C091 CBX3P3-201ENST00000508108 532 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.5□□□□□ -2.17
FREM3P0C091 RNU6-1095P-201ENST00000516148 108 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.5□□□□□ -2.17
FREM3P0C091 AC008676.3-201ENST00000521237 435 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.5□□□□□ -2.17
FREM3P0C091 OR4P1P-201ENST00000530808 1136 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 CR383656.7-201ENST00000548164 174 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 AC004217.3-201ENST00000551552 878 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 TRAV28-201ENST00000557548 323 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.5□□□□□ -2.17
FREM3P0C091 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.5□□□□□ -2.17
FREM3P0C091 MIR3117-201ENST00000584034 78 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.5□□□□□ -2.17
FREM3P0C091 AC112503.2-201ENST00000609005 552 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 AC073569.3-201ENST00000619055 682 ntBASIC1.5□□□□□ -2.17
FREM3P0C091 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.5□□□□□ -2.17
FREM3P0C091 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
FREM3P0C091 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
FREM3P0C091 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
FREM3P0C091 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.49□□□□□ -2.17
FREM3P0C091 RPL27AP8-201ENST00000424277 446 ntBASIC1.49□□□□□ -2.17
FREM3P0C091 RPL23AP76-201ENST00000441860 458 ntBASIC1.49□□□□□ -2.17
FREM3P0C091 AC104073.1-201ENST00000451988 151 ntBASIC1.49□□□□□ -2.17
FREM3P0C091 AC092155.2-201ENST00000454675 477 ntBASIC1.49□□□□□ -2.17
FREM3P0C091 AC078857.1-201ENST00000469870 667 ntBASIC1.49□□□□□ -2.17
FREM3P0C091 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.49□□□□□ -2.17
FREM3P0C091 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.49□□□□□ -2.17
FREM3P0C091 snoZ278.1-201ENST00000517059 112 ntBASIC1.49□□□□□ -2.17
FREM3P0C091 AC104997.1-201ENST00000519761 717 ntBASIC1.49□□□□□ -2.17
FREM3P0C091 AC025755.1-201ENST00000521306 278 ntBASIC1.49□□□□□ -2.17
FREM3P0C091 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.49□□□□□ -2.17
FREM3P0C091 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.49□□□□□ -2.17
FREM3P0C091 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms