Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AL033523.1-201ENST00000605153 153 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 TUG1_1.1-201ENST00000610654 145 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 AC116618.1-201ENST00000634617 774 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
CXCL1P09341 AP006437.1-201ENST00000641440 3685 ntBASIC1.48□□□□□ -2.17
CXCL1P09341 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
CXCL1P09341 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.48□□□□□ -2.17
CXCL1P09341 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.47□□□□□ -2.17
CXCL1P09341 HSPA8P4-201ENST00000511877 1920 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 U3.12-201ENST00000364498 214 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 RNU6-76P-201ENST00000384060 104 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 RNU1-148P-201ENST00000384472 162 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 HMGB1P17-201ENST00000403495 628 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.47□□□□□ -2.17
CXCL1P09341 GSTA9P-201ENST00000406231 611 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 AL139156.1-201ENST00000412785 841 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 AC009963.1-201ENST00000417265 157 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.47□□□□□ -2.17
CXCL1P09341 AL109913.1-201ENST00000421173 514 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 AL139413.1-201ENST00000421309 217 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 AC003685.2-201ENST00000422795 395 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CXCL1P09341 MTND4P24-201ENST00000424002 397 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 RPL35AP22-201ENST00000436855 335 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 AC004383.1-201ENST00000438135 289 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 Z82210.1-201ENST00000440037 231 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 RPS3AP12-201ENST00000443616 753 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.47□□□□□ -2.17
CXCL1P09341 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.47□□□□□ -2.17
CXCL1P09341 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.47□□□□□ -2.17
CXCL1P09341 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.47□□□□□ -2.17
CXCL1P09341 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.47□□□□□ -2.17
CXCL1P09341 RPL32P14-201ENST00000463196 378 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.47□□□□□ -2.17
CXCL1P09341 AC004924.1-201ENST00000480160 781 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.47□□□□□ -2.17
CXCL1P09341 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.47□□□□□ -2.17
CXCL1P09341 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.47□□□□□ -2.17
CXCL1P09341 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.47□□□□□ -2.17
CXCL1P09341 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.47□□□□□ -2.17
CXCL1P09341 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.47□□□□□ -2.17
CXCL1P09341 MRPS17P9-201ENST00000511924 393 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CXCL1P09341 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.47□□□□□ -2.17
CXCL1P09341 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC1.47□□□□□ -2.17
CXCL1P09341 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.47□□□□□ -2.17
CXCL1P09341 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.47□□□□□ -2.17
CXCL1P09341 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.47□□□□□ -2.17
CXCL1P09341 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.47□□□□□ -2.17
CXCL1P09341 LARP7P3-201ENST00000579888 337 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.47□□□□□ -2.17
CXCL1P09341 AC040174.2-201ENST00000602701 465 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 AL671309.1-201ENST00000603750 544 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 AC073592.7-201ENST00000623659 507 ntBASIC1.47□□□□□ -2.17
CXCL1P09341 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.47□□□□□ -2.17
CXCL1P09341 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.46□□□□□ -2.18
CXCL1P09341 AC011477.1-204ENST00000623416 1325 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.46□□□□□ -2.18
CXCL1P09341 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.46□□□□□ -2.18
CXCL1P09341 SNORA80A-201ENST00000363922 136 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
CXCL1P09341 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
CXCL1P09341 MIR23B-201ENST00000384832 97 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 MIR514A1-201ENST00000385133 98 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CXCL1P09341 AL356057.1-202ENST00000402263 756 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 RPL7P27-201ENST00000403775 720 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 RNA5SP270-201ENST00000411361 118 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 AC023141.4-201ENST00000412031 328 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.46□□□□□ -2.18
CXCL1P09341 AC096649.2-201ENST00000416186 393 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.46□□□□□ -2.18
CXCL1P09341 RPS15AP5-201ENST00000436276 388 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.46□□□□□ -2.18
CXCL1P09341 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.46□□□□□ -2.18
CXCL1P09341 AC026801.1-201ENST00000497178 464 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 AC011352.3-201ENST00000505162 593 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 AC104090.1-201ENST00000506341 1171 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 AC093281.2-201ENST00000510153 597 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 SCARNA3-201ENST00000517097 143 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 SNORA31.22-201ENST00000517204 135 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.46□□□□□ -2.18
CXCL1P09341 HMGB1P1-201ENST00000522557 636 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 IGKV3-31-201ENST00000523109 329 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CXCL1P09341 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.46□□□□□ -2.18
CXCL1P09341 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.46□□□□□ -2.18
CXCL1P09341 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.46□□□□□ -2.18
CXCL1P09341 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CXCL1P09341 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CXCL1P09341 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.46□□□□□ -2.18
CXCL1P09341 AC007229.1-201ENST00000590455 412 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.46□□□□□ -2.18
CXCL1P09341 SNRPGP19-201ENST00000603826 189 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 AC020658.4-201ENST00000613987 684 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CXCL1P09341 ZNF849P-201ENST00000594711 1566 ntBASIC1.46□□□□□ -2.18
CXCL1P09341 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms