Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AC104564.1-201ENST00000493028 407 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AC023424.2-201ENST00000493479 777 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 BOLA3P3-201ENST00000505182 232 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.8□□□□□ -2.12
COL4A2P08572 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A2P08572 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.8□□□□□ -2.12
COL4A2P08572 EEF1B2P4-201ENST00000551398 348 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A2P08572 AL670379.6-201ENST00000603753 252 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL670379.11-201ENST00000604059 253 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL670379.10-201ENST00000604330 253 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AC008162.1-201ENST00000604718 254 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL670379.1-201ENST00000604752 252 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL670379.2-201ENST00000604983 252 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL670379.5-201ENST00000605253 252 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL670379.4-201ENST00000605279 254 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL670379.12-201ENST00000605291 253 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL670379.8-201ENST00000605353 252 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL670379.9-201ENST00000605428 253 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL670379.7-201ENST00000605823 252 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AC124016.2-201ENST00000610058 665 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A2P08572 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
COL4A2P08572 AC095031.1-201ENST00000623685 672 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL356094.1-201ENST00000624663 1212 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 Z82209.1-201ENST00000422141 2135 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL4A2P08572 Y_RNA.110-201ENST00000363220 99 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 MIR489-201ENST00000384923 84 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL591034.1-201ENST00000407447 340 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 RNU2-47P-201ENST00000410649 186 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 FCF1P2-201ENST00000415284 583 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A2P08572 MTCO2P1-201ENST00000424648 477 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AC012497.1-201ENST00000429392 575 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 MTCYBP34-201ENST00000439552 670 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 DPPA3P1-201ENST00000448050 469 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AC104308.1-201ENST00000454621 333 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A2P08572 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.8□□□□□ -2.12
COL4A2P08572 RPS23P3-201ENST00000470993 430 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC1.8□□□□□ -2.12
COL4A2P08572 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.8□□□□□ -2.12
COL4A2P08572 AP003168.1-201ENST00000530091 307 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 MTCYBP27-201ENST00000555160 670 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A2P08572 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A2P08572 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
COL4A2P08572 MIR4474-201ENST00000579189 78 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.8□□□□□ -2.12
COL4A2P08572 AL133393.1-201ENST00000603277 287 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL583856.2-201ENST00000606298 543 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AC024560.3-201ENST00000608482 349 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 AL512506.1-201ENST00000613918 449 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
COL4A2P08572 ZNF663P-202ENST00000641770 1131 ntBASIC1.8□□□□□ -2.12
COL4A2P08572 GDI2P1-201ENST00000429312 1336 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.79□□□□□ -2.12
COL4A2P08572 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
COL4A2P08572 AC110774.1-201ENST00000623567 2018 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.79□□□□□ -2.12
COL4A2P08572 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
COL4A2P08572 RNU6-989P-201ENST00000362756 107 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 SNORD82-201ENST00000365530 70 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 RNU6-207P-201ENST00000384137 107 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 HMGN2P20-201ENST00000437531 273 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 RPS15AP7-201ENST00000439294 405 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.79□□□□□ -2.12
COL4A2P08572 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.79□□□□□ -2.12
COL4A2P08572 AC090255.1-201ENST00000495779 349 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 AC005840.1-201ENST00000498412 377 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 AC108078.2-201ENST00000510750 236 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 RNU5A-7P-201ENST00000515979 116 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 RNA5SP135-201ENST00000517019 125 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.79□□□□□ -2.12
COL4A2P08572 AL049838.1-201ENST00000563647 981 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC1.79□□□□□ -2.12
COL4A2P08572 AC092474.3-201ENST00000603022 568 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 AP001330.4-201ENST00000604350 154 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 AC010738.1-201ENST00000604970 987 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
COL4A2P08572 AL590099.1-201ENST00000615276 138 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.79□□□□□ -2.12
COL4A2P08572 AL589994.2-201ENST00000621124 579 ntBASIC1.79□□□□□ -2.12
COL4A2P08572 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL4A2P08572 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
COL4A2P08572 SGO1P2-201ENST00000429458 1589 ntBASIC1.78□□□□□ -2.12
COL4A2P08572 RNU6-1074P-201ENST00000383995 104 ntBASIC1.78□□□□□ -2.12
COL4A2P08572 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
COL4A2P08572 AL136372.1-201ENST00000403060 228 ntBASIC1.78□□□□□ -2.12
COL4A2P08572 AL355615.1-201ENST00000406187 641 ntBASIC1.78□□□□□ -2.12
COL4A2P08572 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.78□□□□□ -2.12
COL4A2P08572 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.78□□□□□ -2.12
COL4A2P08572 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
COL4A2P08572 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.78□□□□□ -2.12
COL4A2P08572 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.78□□□□□ -2.12
COL4A2P08572 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms