Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PABPC1P7-201ENST00000413177 1513 ntBASIC0.69□□□□□ -2.3
APOBP04114 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
APOBP04114 SNORA6-201ENST00000384033 151 ntBASIC0.69□□□□□ -2.3
APOBP04114 RNU1-52P-201ENST00000384190 164 ntBASIC0.69□□□□□ -2.3
APOBP04114 RNA5SP354-201ENST00000391247 136 ntBASIC0.69□□□□□ -2.3
APOBP04114 BX682237.1-201ENST00000415016 335 ntBASIC0.69□□□□□ -2.3
APOBP04114 CR848007.2-201ENST00000424918 787 ntBASIC0.69□□□□□ -2.3
APOBP04114 AL357134.1-201ENST00000445848 426 ntBASIC0.69□□□□□ -2.3
APOBP04114 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC0.69□□□□□ -2.3
APOBP04114 HSPE1P24-201ENST00000450782 238 ntBASIC0.69□□□□□ -2.3
APOBP04114 MTCO2P9-201ENST00000503214 694 ntBASIC0.69□□□□□ -2.3
APOBP04114 HAUS1P1-201ENST00000505275 832 ntBASIC0.69□□□□□ -2.3
APOBP04114 RNA5SP364-201ENST00000516938 78 ntBASIC0.69□□□□□ -2.3
APOBP04114 AC083923.1-201ENST00000523708 376 ntBASIC0.69□□□□□ -2.3
APOBP04114 AP005435.4-201ENST00000529514 284 ntBASIC0.69□□□□□ -2.3
APOBP04114 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.69□□□□□ -2.3
APOBP04114 AC009229.3-201ENST00000608056 282 ntBASIC0.69□□□□□ -2.3
APOBP04114 AC112503.2-201ENST00000609005 552 ntBASIC0.69□□□□□ -2.3
APOBP04114 AC012640.5-201ENST00000623897 319 ntBASIC0.69□□□□□ -2.3
APOBP04114 AL356118.1-201ENST00000635272 1078 ntBASIC0.69□□□□□ -2.3
APOBP04114 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC0.69□□□□□ -2.3
APOBP04114 TEX21P-201ENST00000447107 1476 ntBASIC0.69□□□□□ -2.3
APOBP04114 RNU6-203P-201ENST00000384038 104 ntBASIC0.69□□□□□ -2.3
APOBP04114 AC022493.1-201ENST00000492984 337 ntBASIC0.69□□□□□ -2.3
APOBP04114 MIR4474-201ENST00000579189 78 ntBASIC0.69□□□□□ -2.3
APOBP04114 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.69□□□□□ -2.3
APOBP04114 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.69□□□□□ -2.3
APOBP04114 AL358176.2-201ENST00000425769 204 ntBASIC0.69□□□□□ -2.3
APOBP04114 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC0.69□□□□□ -2.3
APOBP04114 DUXAP8-207ENST00000456786 622 ntBASIC0.69□□□□□ -2.3
APOBP04114 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.69□□□□□ -2.3
APOBP04114 LRRC34P2-201ENST00000514850 553 ntBASIC0.69□□□□□ -2.3
APOBP04114 U3.40-201ENST00000408706 208 ntBASIC0.68□□□□□ -2.3
APOBP04114 PGBD4P6-201ENST00000421501 610 ntBASIC0.68□□□□□ -2.3
APOBP04114 PSMA2P3-201ENST00000429685 675 ntBASIC0.68□□□□□ -2.3
APOBP04114 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC0.68□□□□□ -2.3
APOBP04114 AC093281.2-201ENST00000510153 597 ntBASIC0.68□□□□□ -2.3
APOBP04114 SUMO2P12-201ENST00000405924 140 ntBASIC0.68□□□□□ -2.3
APOBP04114 GPM6BP3-201ENST00000442797 145 ntBASIC0.68□□□□□ -2.3
APOBP04114 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.68□□□□□ -2.3
APOBP04114 RPL31P58-201ENST00000469001 379 ntBASIC0.68□□□□□ -2.3
APOBP04114 AC093852.1-201ENST00000503587 266 ntBASIC0.68□□□□□ -2.3
APOBP04114 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.68□□□□□ -2.3
APOBP04114 BNIP3P7-201ENST00000605641 516 ntBASIC0.68□□□□□ -2.3
APOBP04114 AL135786.2-201ENST00000608422 615 ntBASIC0.68□□□□□ -2.3
APOBP04114 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.68□□□□□ -2.3
APOBP04114 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
APOBP04114 RPL30P12-201ENST00000474666 353 ntBASIC0.68□□□□□ -2.3
APOBP04114 HSPE1P20-201ENST00000538133 289 ntBASIC0.68□□□□□ -2.3
APOBP04114 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.68□□□□□ -2.3
APOBP04114 MTND5P9-201ENST00000503854 1755 ntBASIC0.67□□□□□ -2.3
APOBP04114 AL445687.1-201ENST00000439946 251 ntBASIC0.67□□□□□ -2.3
APOBP04114 MTND4LP12-201ENST00000448237 295 ntBASIC0.67□□□□□ -2.3
APOBP04114 AC104308.1-201ENST00000454621 333 ntBASIC0.67□□□□□ -2.3
APOBP04114 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.67□□□□□ -2.3
APOBP04114 AC093752.1-206ENST00000511823 336 ntBASIC0.67□□□□□ -2.3
APOBP04114 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC0.67□□□□□ -2.3
APOBP04114 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
APOBP04114 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.67□□□□□ -2.3
APOBP04114 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.67□□□□□ -2.3
APOBP04114 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC0.67□□□□□ -2.3
APOBP04114 AC233266.2-201ENST00000567067 528 ntBASIC0.67□□□□□ -2.3
APOBP04114 AC123912.5-201ENST00000605470 343 ntBASIC0.67□□□□□ -2.3
APOBP04114 AL589935.2-201ENST00000616471 1231 ntBASIC0.67□□□□□ -2.3
APOBP04114 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
APOBP04114 RPL7P34-201ENST00000433316 712 ntBASIC0.67□□□□□ -2.3
APOBP04114 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.67□□□□□ -2.3
APOBP04114 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC0.67□□□□□ -2.3
APOBP04114 AL109933.3-201ENST00000619095 188 ntBASIC0.67□□□□□ -2.3
APOBP04114 AL138955.1-201ENST00000622881 1040 ntBASIC0.67□□□□□ -2.3
APOBP04114 AC010487.4-201ENST00000637027 61 ntBASIC0.67□□□□□ -2.3
APOBP04114 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
APOBP04114 SNORD56.5-201ENST00000364281 72 ntBASIC0.67□□□□□ -2.3
APOBP04114 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC0.67□□□□□ -2.3
APOBP04114 RPS20P15-201ENST00000412792 311 ntBASIC0.67□□□□□ -2.3
APOBP04114 SNRPEP10-201ENST00000420249 274 ntBASIC0.67□□□□□ -2.3
APOBP04114 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.67□□□□□ -2.3
APOBP04114 RPS23P3-201ENST00000470993 430 ntBASIC0.67□□□□□ -2.3
APOBP04114 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.67□□□□□ -2.3
APOBP04114 AC021755.4-201ENST00000616620 456 ntBASIC0.67□□□□□ -2.3
APOBP04114 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.67□□□□□ -2.3
APOBP04114 MIR6513-201ENST00000621188 64 ntBASIC0.67□□□□□ -2.3
APOBP04114 AL031601.2-202ENST00000622650 282 ntBASIC0.67□□□□□ -2.3
APOBP04114 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.66□□□□□ -2.3
APOBP04114 Y_RNA.433-201ENST00000384089 102 ntBASIC0.66□□□□□ -2.3
APOBP04114 MIR513A1-201ENST00000385138 129 ntBASIC0.66□□□□□ -2.3
APOBP04114 RNA5SP492-201ENST00000411330 114 ntBASIC0.66□□□□□ -2.3
APOBP04114 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.66□□□□□ -2.3
APOBP04114 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.66□□□□□ -2.3
APOBP04114 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC0.66□□□□□ -2.3
APOBP04114 SNORD59.2-201ENST00000516873 68 ntBASIC0.66□□□□□ -2.3
APOBP04114 AP003072.2-201ENST00000527756 676 ntBASIC0.66□□□□□ -2.3
APOBP04114 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.66□□□□□ -2.3
APOBP04114 MIR4711-201ENST00000578274 70 ntBASIC0.66□□□□□ -2.3
APOBP04114 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
APOBP04114 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
APOBP04114 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
APOBP04114 SNORA62.1-201ENST00000364287 154 ntBASIC0.66□□□□□ -2.3
APOBP04114 RPL5P19-201ENST00000404228 893 ntBASIC0.66□□□□□ -2.3
APOBP04114 HSPE1P1-201ENST00000421494 318 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms