Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 CASC19-280ENST00000642102 1351 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL2A1P02458 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
COL2A1P02458 Y_RNA.38-201ENST00000362617 102 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 U8.2-201ENST00000363156 134 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 RNU6-114P-201ENST00000384704 105 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 MIR196B-201ENST00000384852 84 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 SNORA40.3-201ENST00000390964 122 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 FCF1P10-201ENST00000407590 479 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 MIR1303-201ENST00000408625 86 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.19□□□□□ -1.9
COL2A1P02458 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.19□□□□□ -1.9
COL2A1P02458 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.19□□□□□ -1.9
COL2A1P02458 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.19□□□□□ -1.9
COL2A1P02458 MTND4LP10-201ENST00000435146 291 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 RAB11AP1-201ENST00000442978 646 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.19□□□□□ -1.9
COL2A1P02458 NDUFB4P2-201ENST00000509515 391 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL2A1P02458 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 RNU6-1225P-201ENST00000516336 65 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 RN7SKP31-201ENST00000516354 278 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.19□□□□□ -1.9
COL2A1P02458 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.19□□□□□ -1.9
COL2A1P02458 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.19□□□□□ -1.9
COL2A1P02458 AC123904.3-201ENST00000547218 814 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 AL049870.4-201ENST00000555741 486 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.19□□□□□ -1.9
COL2A1P02458 FGF7P1-201ENST00000582820 288 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 MIR3605-201ENST00000583214 100 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 AC025449.1-201ENST00000603896 529 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 AC112220.3-201ENST00000605502 502 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 MIR6817-201ENST00000615588 66 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 AC011472.4-201ENST00000615848 491 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
COL2A1P02458 MIR3688-2-201ENST00000636963 87 ntBASIC3.19□□□□□ -1.9
COL2A1P02458 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.19□□□□□ -1.9
COL2A1P02458 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
COL2A1P02458 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COL2A1P02458 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
COL2A1P02458 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL2A1P02458 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL2A1P02458 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COL2A1P02458 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL2A1P02458 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
COL2A1P02458 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.18□□□□□ -1.9
COL2A1P02458 AC007742.1-201ENST00000425789 329 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 MTCO2P11-201ENST00000431069 680 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
COL2A1P02458 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.18□□□□□ -1.9
COL2A1P02458 ELOCP26-201ENST00000436067 329 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.18□□□□□ -1.9
COL2A1P02458 AL353093.1-201ENST00000441292 436 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 AL592447.1-201ENST00000447592 540 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 RPS27P29-201ENST00000463110 252 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 AC013828.1-201ENST00000481845 158 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.18□□□□□ -1.9
COL2A1P02458 FAM172BP-201ENST00000487497 1089 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 MTCO2P30-201ENST00000503662 364 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.18□□□□□ -1.9
COL2A1P02458 AC096725.1-201ENST00000514266 313 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 RNU6-875P-201ENST00000516488 106 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 RNU6-528P-201ENST00000516926 100 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.18□□□□□ -1.9
COL2A1P02458 OR4A45P-201ENST00000529954 901 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.18□□□□□ -1.9
COL2A1P02458 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.18□□□□□ -1.9
COL2A1P02458 AC009101.1-201ENST00000568135 242 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 SNORD53-201ENST00000579969 78 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 AC103710.4-201ENST00000609301 899 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 AC023158.2-201ENST00000614876 543 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 U4.5-201ENST00000617137 123 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 AC120349.2-201ENST00000625002 298 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 MTND5P17-201ENST00000418405 1603 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 AL157700.1-201ENST00000561973 1432 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.18□□□□□ -1.9
COL2A1P02458 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL2A1P02458 SEC63P2-201ENST00000503863 1939 ntBASIC3.18□□□□□ -1.9
COL2A1P02458 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COL2A1P02458 MTCO1P9-201ENST00000505577 1534 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 RPL21P132-201ENST00000331267 462 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 Y_RNA.11-201ENST00000362375 109 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 AC019155.1-201ENST00000382242 574 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 Y_RNA.409-201ENST00000383990 98 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 RNU5A-6P-201ENST00000384136 116 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 MT-TL1-201ENST00000386347 75 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 MT-TP-201ENST00000387461 68 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 RPL23AP47-201ENST00000408017 460 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.17□□□□□ -1.9
COL2A1P02458 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.17□□□□□ -1.9
COL2A1P02458 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.17□□□□□ -1.9
COL2A1P02458 AL034379.1-201ENST00000423216 253 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 BX276092.3-201ENST00000424182 230 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 AC233728.2-201ENST00000425348 757 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 ELOCP14-201ENST00000428070 331 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.17□□□□□ -1.9
COL2A1P02458 MTND3P21-201ENST00000433774 331 ntBASIC3.17□□□□□ -1.9
COL2A1P02458 ELOCP7-201ENST00000439968 331 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms