Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AL158801.5-201ENST00000623123 465 ntBASIC1.53□□□□□ -2.16
TNFP01375 AC027309.3-201ENST00000623419 351 ntBASIC1.53□□□□□ -2.16
TNFP01375 CR381572.1-201ENST00000625098 102 ntBASIC1.53□□□□□ -2.16
TNFP01375 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.52□□□□□ -2.17
TNFP01375 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TNFP01375 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
TNFP01375 RNU6-234P-201ENST00000365229 104 ntBASIC1.52□□□□□ -2.17
TNFP01375 RPS15AP38-201ENST00000413110 372 ntBASIC1.52□□□□□ -2.17
TNFP01375 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.52□□□□□ -2.17
TNFP01375 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.52□□□□□ -2.17
TNFP01375 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.52□□□□□ -2.17
TNFP01375 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.52□□□□□ -2.17
TNFP01375 RNU6-1053P-201ENST00000515930 101 ntBASIC1.52□□□□□ -2.17
TNFP01375 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.52□□□□□ -2.17
TNFP01375 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.52□□□□□ -2.17
TNFP01375 AC011611.5-201ENST00000552477 578 ntBASIC1.52□□□□□ -2.17
TNFP01375 DNAJC19P9-201ENST00000555084 351 ntBASIC1.52□□□□□ -2.17
TNFP01375 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.52□□□□□ -2.17
TNFP01375 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.52□□□□□ -2.17
TNFP01375 FAM60BP-201ENST00000578364 658 ntBASIC1.52□□□□□ -2.17
TNFP01375 MIR4287-201ENST00000579398 78 ntBASIC1.52□□□□□ -2.17
TNFP01375 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.52□□□□□ -2.17
TNFP01375 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.52□□□□□ -2.17
TNFP01375 SEPT7P9-203ENST00000604116 343 ntBASIC1.52□□□□□ -2.17
TNFP01375 AL645939.4-201ENST00000604495 135 ntBASIC1.52□□□□□ -2.17
TNFP01375 AC103710.4-201ENST00000609301 899 ntBASIC1.52□□□□□ -2.17
TNFP01375 AL627230.6-201ENST00000611129 280 ntBASIC1.52□□□□□ -2.17
TNFP01375 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TNFP01375 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.52□□□□□ -2.17
TNFP01375 MIR7515-201ENST00000637837 67 ntBASIC1.52□□□□□ -2.17
TNFP01375 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.52□□□□□ -2.17
TNFP01375 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
TNFP01375 AL513185.3-201ENST00000433335 1300 ntBASIC1.51□□□□□ -2.17
TNFP01375 AC011477.1-204ENST00000623416 1325 ntBASIC1.51□□□□□ -2.17
TNFP01375 DDX10P1-201ENST00000448545 1933 ntBASIC1.51□□□□□ -2.17
TNFP01375 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
TNFP01375 TATDN1P1-201ENST00000414123 891 ntBASIC1.51□□□□□ -2.17
TNFP01375 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.51□□□□□ -2.17
TNFP01375 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.51□□□□□ -2.17
TNFP01375 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.51□□□□□ -2.17
TNFP01375 RPL31P63-201ENST00000422565 375 ntBASIC1.51□□□□□ -2.17
TNFP01375 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.51□□□□□ -2.17
TNFP01375 AMD1P1-201ENST00000457220 922 ntBASIC1.51□□□□□ -2.17
TNFP01375 snoU13.28-201ENST00000459235 104 ntBASIC1.51□□□□□ -2.17
TNFP01375 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.51□□□□□ -2.17
TNFP01375 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.51□□□□□ -2.17
TNFP01375 RPL23AP41-201ENST00000484754 458 ntBASIC1.51□□□□□ -2.17
TNFP01375 MRPS17P9-201ENST00000511924 393 ntBASIC1.51□□□□□ -2.17
TNFP01375 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.51□□□□□ -2.17
TNFP01375 SNORA31.24-201ENST00000517232 57 ntBASIC1.51□□□□□ -2.17
TNFP01375 AP005902.1-201ENST00000521358 186 ntBASIC1.51□□□□□ -2.17
TNFP01375 AC087441.2-201ENST00000529141 262 ntBASIC1.51□□□□□ -2.17
TNFP01375 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.51□□□□□ -2.17
TNFP01375 AC074029.2-201ENST00000551045 634 ntBASIC1.51□□□□□ -2.17
TNFP01375 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.51□□□□□ -2.17
TNFP01375 AC015720.1-201ENST00000565251 277 ntBASIC1.51□□□□□ -2.17
TNFP01375 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.51□□□□□ -2.17
TNFP01375 AC007229.1-201ENST00000590455 412 ntBASIC1.51□□□□□ -2.17
TNFP01375 AC005498.1-201ENST00000592125 465 ntBASIC1.51□□□□□ -2.17
TNFP01375 AC040174.2-201ENST00000602701 465 ntBASIC1.51□□□□□ -2.17
TNFP01375 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TNFP01375 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TNFP01375 ADAM3A-203ENST00000461344 2157 ntBASIC1.51□□□□□ -2.17
TNFP01375 CCT4P2-201ENST00000233836 1548 ntBASIC1.5□□□□□ -2.17
TNFP01375 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.5□□□□□ -2.17
TNFP01375 MTND4P27-201ENST00000450813 1354 ntBASIC1.5□□□□□ -2.17
TNFP01375 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TNFP01375 RNU6-339P-201ENST00000384310 107 ntBASIC1.5□□□□□ -2.17
TNFP01375 RNU6-31P-201ENST00000384388 108 ntBASIC1.5□□□□□ -2.17
TNFP01375 NPM1P10-201ENST00000398310 865 ntBASIC1.5□□□□□ -2.17
TNFP01375 RPS3AP24-201ENST00000407896 734 ntBASIC1.5□□□□□ -2.17
TNFP01375 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.5□□□□□ -2.17
TNFP01375 EIF4EP4-201ENST00000424916 578 ntBASIC1.5□□□□□ -2.17
TNFP01375 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.5□□□□□ -2.17
TNFP01375 USP12PX-201ENST00000432383 1057 ntBASIC1.5□□□□□ -2.17
TNFP01375 USP9YP10-201ENST00000454868 628 ntBASIC1.5□□□□□ -2.17
TNFP01375 RNU7-95P-201ENST00000459222 64 ntBASIC1.5□□□□□ -2.17
TNFP01375 AC023790.1-201ENST00000482174 347 ntBASIC1.5□□□□□ -2.17
TNFP01375 AL163540.1-201ENST00000485382 386 ntBASIC1.5□□□□□ -2.17
TNFP01375 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.5□□□□□ -2.17
TNFP01375 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC1.5□□□□□ -2.17
TNFP01375 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TNFP01375 RNU4-18P-201ENST00000516751 149 ntBASIC1.5□□□□□ -2.17
TNFP01375 OR4V1P-201ENST00000525394 1140 ntBASIC1.5□□□□□ -2.17
TNFP01375 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
TNFP01375 RPS3AP4-201ENST00000555161 764 ntBASIC1.5□□□□□ -2.17
TNFP01375 AC044913.1-201ENST00000557200 430 ntBASIC1.5□□□□□ -2.17
TNFP01375 MED28P6-201ENST00000558776 231 ntBASIC1.5□□□□□ -2.17
TNFP01375 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.5□□□□□ -2.17
TNFP01375 AC090897.2-201ENST00000581715 130 ntBASIC1.5□□□□□ -2.17
TNFP01375 AC012254.4-201ENST00000588843 273 ntBASIC1.5□□□□□ -2.17
TNFP01375 AC068944.2-201ENST00000610373 403 ntBASIC1.5□□□□□ -2.17
TNFP01375 AP006248.3-201ENST00000623580 594 ntBASIC1.5□□□□□ -2.17
TNFP01375 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.5□□□□□ -2.17
TNFP01375 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
TNFP01375 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TNFP01375 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
TNFP01375 SLC9B1P2-201ENST00000398120 1184 ntBASIC1.49□□□□□ -2.17
TNFP01375 MIR1304-201ENST00000408243 91 ntBASIC1.49□□□□□ -2.17
TNFP01375 RNU6-174P-201ENST00000410406 106 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms