Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LDLRP01130 AC104985.2-201ENST00000620598 500 ntBASIC3.42□□□□□ -1.86
LDLRP01130 AC079597.1-201ENST00000624306 508 ntBASIC3.42□□□□□ -1.86
LDLRP01130 AL157786.1-207ENST00000627771 695 ntBASIC3.42□□□□□ -1.86
LDLRP01130 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LDLRP01130 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
LDLRP01130 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LDLRP01130 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.42□□□□□ -1.86
LDLRP01130 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LDLRP01130 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.41□□□□□ -1.86
LDLRP01130 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LDLRP01130 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.41□□□□□ -1.86
LDLRP01130 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LDLRP01130 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LDLRP01130 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LDLRP01130 AC068647.1-201ENST00000489539 2265 ntBASIC3.41□□□□□ -1.86
LDLRP01130 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
LDLRP01130 MTCO1P9-201ENST00000505577 1534 ntBASIC3.41□□□□□ -1.86
LDLRP01130 MFSD8-236ENST00000641509 4050 ntBASIC3.41□□□□□ -1.86
LDLRP01130 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LDLRP01130 RNU6-797P-201ENST00000363101 109 ntBASIC3.41□□□□□ -1.86
LDLRP01130 RN7SKP226-201ENST00000364912 300 ntBASIC3.41□□□□□ -1.86
LDLRP01130 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.41□□□□□ -1.86
LDLRP01130 MIR135A2-201ENST00000384854 100 ntBASIC3.41□□□□□ -1.86
LDLRP01130 MIR128-1-201ENST00000384921 82 ntBASIC3.41□□□□□ -1.86
LDLRP01130 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
LDLRP01130 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LDLRP01130 RPS20P2-201ENST00000402520 389 ntBASIC3.41□□□□□ -1.86
LDLRP01130 AL122016.1-201ENST00000403365 367 ntBASIC3.41□□□□□ -1.86
LDLRP01130 ATP5A1P2-201ENST00000412323 255 ntBASIC3.41□□□□□ -1.86
LDLRP01130 USP9YP6-201ENST00000413550 854 ntBASIC3.41□□□□□ -1.86
LDLRP01130 AC016831.2-201ENST00000417179 352 ntBASIC3.41□□□□□ -1.86
LDLRP01130 SSXP9-201ENST00000417503 292 ntBASIC3.41□□□□□ -1.86
LDLRP01130 ZNF863P-201ENST00000426746 417 ntBASIC3.41□□□□□ -1.86
LDLRP01130 BX679664.1-201ENST00000434429 253 ntBASIC3.41□□□□□ -1.86
LDLRP01130 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.41□□□□□ -1.86
LDLRP01130 SNRPEP8-201ENST00000442866 260 ntBASIC3.41□□□□□ -1.86
LDLRP01130 USP9YP12-201ENST00000450481 570 ntBASIC3.41□□□□□ -1.86
LDLRP01130 AC234775.1-201ENST00000454247 670 ntBASIC3.41□□□□□ -1.86
LDLRP01130 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.41□□□□□ -1.86
LDLRP01130 AP001486.1-201ENST00000463339 476 ntBASIC3.41□□□□□ -1.86
LDLRP01130 FAM92A1P2-202ENST00000504766 877 ntBASIC3.41□□□□□ -1.86
LDLRP01130 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.41□□□□□ -1.86
LDLRP01130 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.41□□□□□ -1.86
LDLRP01130 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.41□□□□□ -1.86
LDLRP01130 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.41□□□□□ -1.86
LDLRP01130 AC008011.1-201ENST00000545989 227 ntBASIC3.41□□□□□ -1.86
LDLRP01130 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.41□□□□□ -1.86
LDLRP01130 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.41□□□□□ -1.86
LDLRP01130 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.41□□□□□ -1.86
LDLRP01130 UBE2L4-201ENST00000587688 464 ntBASIC3.41□□□□□ -1.86
LDLRP01130 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.41□□□□□ -1.86
LDLRP01130 AL158211.4-201ENST00000606988 584 ntBASIC3.41□□□□□ -1.86
LDLRP01130 AC098614.4-201ENST00000607601 462 ntBASIC3.41□□□□□ -1.86
LDLRP01130 AC104010.1-201ENST00000616889 150 ntBASIC3.41□□□□□ -1.86
LDLRP01130 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LDLRP01130 AL158801.5-201ENST00000623123 465 ntBASIC3.41□□□□□ -1.86
LDLRP01130 AC112204.3-201ENST00000623822 332 ntBASIC3.41□□□□□ -1.86
LDLRP01130 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.41□□□□□ -1.86
LDLRP01130 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.41□□□□□ -1.86
LDLRP01130 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LDLRP01130 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LDLRP01130 MTND4P29-201ENST00000503122 1372 ntBASIC3.4□□□□□ -1.86
LDLRP01130 ELF2P3-201ENST00000445099 1506 ntBASIC3.4□□□□□ -1.86
LDLRP01130 AP001350.1-201ENST00000601906 1524 ntBASIC3.4□□□□□ -1.86
LDLRP01130 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
LDLRP01130 RNU6-1155P-201ENST00000363554 107 ntBASIC3.4□□□□□ -1.87
LDLRP01130 Y_RNA.256-201ENST00000364594 104 ntBASIC3.4□□□□□ -1.87
LDLRP01130 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.4□□□□□ -1.87
LDLRP01130 RNU6-1042P-201ENST00000384204 107 ntBASIC3.4□□□□□ -1.87
LDLRP01130 Y_RNA.500-201ENST00000384466 111 ntBASIC3.4□□□□□ -1.87
LDLRP01130 RNU6-297P-201ENST00000384636 107 ntBASIC3.4□□□□□ -1.87
LDLRP01130 MIR490-201ENST00000384865 128 ntBASIC3.4□□□□□ -1.87
LDLRP01130 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.4□□□□□ -1.87
LDLRP01130 BEND7P1-201ENST00000422058 457 ntBASIC3.4□□□□□ -1.87
LDLRP01130 RPL21P66-201ENST00000426566 466 ntBASIC3.4□□□□□ -1.87
LDLRP01130 ISCA1P1-201ENST00000426679 387 ntBASIC3.4□□□□□ -1.87
LDLRP01130 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.4□□□□□ -1.87
LDLRP01130 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.4□□□□□ -1.87
LDLRP01130 AC010655.1-201ENST00000449336 292 ntBASIC3.4□□□□□ -1.87
LDLRP01130 AP1S2P1-201ENST00000457344 379 ntBASIC3.4□□□□□ -1.87
LDLRP01130 RPS4XP2-201ENST00000458402 793 ntBASIC3.4□□□□□ -1.87
LDLRP01130 RN7SL442P-201ENST00000473804 320 ntBASIC3.4□□□□□ -1.87
LDLRP01130 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LDLRP01130 AC004062.1-201ENST00000509926 645 ntBASIC3.4□□□□□ -1.87
LDLRP01130 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.4□□□□□ -1.87
LDLRP01130 AC074344.1-201ENST00000512823 224 ntBASIC3.4□□□□□ -1.87
LDLRP01130 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.4□□□□□ -1.87
LDLRP01130 RNU2-27P-201ENST00000516185 142 ntBASIC3.4□□□□□ -1.87
LDLRP01130 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.4□□□□□ -1.87
LDLRP01130 AP006245.1-201ENST00000522549 120 ntBASIC3.4□□□□□ -1.87
LDLRP01130 AC007458.1-201ENST00000542812 373 ntBASIC3.4□□□□□ -1.87
LDLRP01130 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.4□□□□□ -1.87
LDLRP01130 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.4□□□□□ -1.87
LDLRP01130 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.4□□□□□ -1.87
LDLRP01130 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.4□□□□□ -1.87
LDLRP01130 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.4□□□□□ -1.87
LDLRP01130 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.4□□□□□ -1.87
LDLRP01130 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.4□□□□□ -1.87
LDLRP01130 OR10AB1P-201ENST00000609613 938 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms