Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 TAS2R15P-201ENST00000390674 928 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 RNA5SP252-201ENST00000391131 119 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 AC245054.2-201ENST00000415639 319 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 AC011233.1-201ENST00000422812 283 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 TRIAP1P1-201ENST00000427062 225 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.35□□□□□ -1.87
GGPS1O95749 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.35□□□□□ -1.87
GGPS1O95749 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.35□□□□□ -1.87
GGPS1O95749 MTCO3P45-201ENST00000443036 613 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 AL135938.1-201ENST00000443141 297 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 RPS20P20-201ENST00000460498 340 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 RPL21P8-201ENST00000465083 535 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 UBE2DNL-203ENST00000474922 222 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 RPS15AP36-201ENST00000492022 382 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 AC083906.5-201ENST00000503722 328 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.35□□□□□ -1.87
GGPS1O95749 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.35□□□□□ -1.87
GGPS1O95749 SCGB1D5P-201ENST00000515134 247 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.35□□□□□ -1.87
GGPS1O95749 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.35□□□□□ -1.87
GGPS1O95749 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.35□□□□□ -1.87
GGPS1O95749 HMGB1P14-201ENST00000557424 591 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.35□□□□□ -1.87
GGPS1O95749 TPMTP1-201ENST00000592307 737 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.35□□□□□ -1.87
GGPS1O95749 AL355816.2-201ENST00000610049 647 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.35□□□□□ -1.87
GGPS1O95749 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.35□□□□□ -1.87
GGPS1O95749 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
GGPS1O95749 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.35□□□□□ -1.87
GGPS1O95749 AC093831.2-201ENST00000624393 3427 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 AL079305.1-201ENST00000623159 3008 ntBASIC3.35□□□□□ -1.87
GGPS1O95749 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
GGPS1O95749 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
GGPS1O95749 AP000568.1-201ENST00000282964 442 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
GGPS1O95749 RNU6-500P-201ENST00000362349 107 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 Y_RNA.500-201ENST00000384466 111 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 TXNP7-201ENST00000406296 293 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 HSPE1P1-201ENST00000421494 318 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.34□□□□□ -1.87
GGPS1O95749 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.34□□□□□ -1.87
GGPS1O95749 TRIM60P18-201ENST00000441518 828 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 RPL37P4-201ENST00000448908 268 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.34□□□□□ -1.87
GGPS1O95749 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.34□□□□□ -1.87
GGPS1O95749 RN7SL75P-201ENST00000461926 281 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
GGPS1O95749 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.34□□□□□ -1.87
GGPS1O95749 CDC42P4-201ENST00000510507 563 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.34□□□□□ -1.87
GGPS1O95749 AC091826.1-201ENST00000514065 313 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 NRON-201ENST00000517270 370 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.34□□□□□ -1.87
GGPS1O95749 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
GGPS1O95749 AP000857.1-201ENST00000532151 543 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.34□□□□□ -1.87
GGPS1O95749 LRRC34P1-201ENST00000542742 915 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 ACTR3BP3-201ENST00000565577 979 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.34□□□□□ -1.87
GGPS1O95749 AL133393.1-201ENST00000603277 287 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
GGPS1O95749 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.34□□□□□ -1.87
GGPS1O95749 AC004696.1-201ENST00000614345 607 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 AC010133.1-201ENST00000615809 842 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
GGPS1O95749 OR5H6-203ENST00000642105 978 ntBASIC3.34□□□□□ -1.87
GGPS1O95749 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
GGPS1O95749 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GGPS1O95749 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GGPS1O95749 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
GGPS1O95749 OR5J1P-201ENST00000313544 939 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 Y_RNA.97-201ENST00000363094 102 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 U8.14-201ENST00000390843 143 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 SPA17P1-201ENST00000416656 452 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.33□□□□□ -1.88
GGPS1O95749 AC005005.2-201ENST00000420779 380 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 RPS27AP14-201ENST00000422868 454 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 AL390023.1-201ENST00000428836 262 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.33□□□□□ -1.88
GGPS1O95749 MTCYBP39-201ENST00000437562 491 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.33□□□□□ -1.88
GGPS1O95749 CBWD4P-201ENST00000445695 655 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.33□□□□□ -1.88
GGPS1O95749 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.33□□□□□ -1.88
GGPS1O95749 RNU6-420P-201ENST00000458780 107 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 RNU7-59P-201ENST00000459101 61 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 AC008481.1-201ENST00000463278 396 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 SETP11-201ENST00000473027 690 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 AL135752.1-201ENST00000479477 471 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 AC055855.1-201ENST00000489563 579 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.33□□□□□ -1.88
GGPS1O95749 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.33□□□□□ -1.88
GGPS1O95749 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.33□□□□□ -1.88
GGPS1O95749 AP000867.2-201ENST00000532468 320 ntBASIC3.33□□□□□ -1.88
GGPS1O95749 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.33□□□□□ -1.88
GGPS1O95749 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GGPS1O95749 AC007954.1-201ENST00000554198 494 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms