Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC108059.3-201ENST00000456388 214 ntBASIC5.02□□□□□ -1.61
RAPGEF3O95398 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.02□□□□□ -1.61
RAPGEF3O95398 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.02□□□□□ -1.61
RAPGEF3O95398 FAM92A1P2-202ENST00000504766 877 ntBASIC5.02□□□□□ -1.61
RAPGEF3O95398 AC105914.1-201ENST00000511798 226 ntBASIC5.02□□□□□ -1.61
RAPGEF3O95398 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.02□□□□□ -1.61
RAPGEF3O95398 AC017037.2-201ENST00000513850 890 ntBASIC5.02□□□□□ -1.61
RAPGEF3O95398 AC091826.1-201ENST00000514065 313 ntBASIC5.02□□□□□ -1.61
RAPGEF3O95398 RN7SKP209-201ENST00000516888 304 ntBASIC5.02□□□□□ -1.61
RAPGEF3O95398 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.02□□□□□ -1.61
RAPGEF3O95398 AC103783.1-201ENST00000520506 373 ntBASIC5.02□□□□□ -1.61
RAPGEF3O95398 AC109635.3-201ENST00000529536 185 ntBASIC5.02□□□□□ -1.61
RAPGEF3O95398 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RAPGEF3O95398 HIGD1AP1-201ENST00000550979 275 ntBASIC5.02□□□□□ -1.61
RAPGEF3O95398 COX6CP3-201ENST00000580869 223 ntBASIC5.02□□□□□ -1.61
RAPGEF3O95398 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC5.02□□□□□ -1.61
RAPGEF3O95398 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC5.02□□□□□ -1.61
RAPGEF3O95398 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.02□□□□□ -1.61
RAPGEF3O95398 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RAPGEF3O95398 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RAPGEF3O95398 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.02□□□□□ -1.61
RAPGEF3O95398 CEP170P1-201ENST00000502249 4587 ntBASIC5.02□□□□□ -1.61
RAPGEF3O95398 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RAPGEF3O95398 AC027290.2-201ENST00000623210 18662 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RAPGEF3O95398 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RAPGEF3O95398 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RAPGEF3O95398 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
RAPGEF3O95398 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RAPGEF3O95398 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RAPGEF3O95398 RNY4P16-201ENST00000364768 94 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 RNU6-282P-201ENST00000365357 103 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 AL133412.1-201ENST00000380194 2992 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 Y_RNA.548-201ENST00000384656 105 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 MIR19A-201ENST00000384878 82 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 RNU2-62P-201ENST00000410868 191 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.01□□□□□ -1.61
RAPGEF3O95398 AC092832.1-201ENST00000422934 400 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 TIMM9P1-201ENST00000436122 256 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 AF228730.2-201ENST00000438784 848 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 RAC1P7-201ENST00000445367 377 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC5.01□□□□□ -1.61
RAPGEF3O95398 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.01□□□□□ -1.61
RAPGEF3O95398 snoU13.3-201ENST00000459441 104 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC5.01□□□□□ -1.61
RAPGEF3O95398 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.01□□□□□ -1.61
RAPGEF3O95398 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC5.01□□□□□ -1.61
RAPGEF3O95398 Y_RNA.693-201ENST00000516641 110 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 RNU6-528P-201ENST00000516926 100 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.01□□□□□ -1.61
RAPGEF3O95398 MIR548S-201ENST00000581352 82 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.01□□□□□ -1.61
RAPGEF3O95398 AL391646.1-201ENST00000603860 190 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 BRDTP1-201ENST00000605735 677 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 AC004908.2-201ENST00000609090 574 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RAPGEF3O95398 AL356585.4-201ENST00000623078 1229 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RAPGEF3O95398 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RAPGEF3O95398 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RAPGEF3O95398 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC5.01□□□□□ -1.61
RAPGEF3O95398 MAPK10-253ENST00000641010 4072 ntBASIC5.01□□□□□ -1.61
RAPGEF3O95398 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5□□□□□ -1.61
RAPGEF3O95398 LINC02471-203ENST00000641941 4752 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC5□□□□□ -1.61
RAPGEF3O95398 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RAPGEF3O95398 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RAPGEF3O95398 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RAPGEF3O95398 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RAPGEF3O95398 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RAPGEF3O95398 RNU6-1078P-201ENST00000364522 103 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 RPS15AP12-201ENST00000419498 388 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 ELOCP4-201ENST00000420090 333 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5□□□□□ -1.61
RAPGEF3O95398 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC5□□□□□ -1.61
RAPGEF3O95398 CKS1BP5-201ENST00000434172 273 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5□□□□□ -1.61
RAPGEF3O95398 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5□□□□□ -1.61
RAPGEF3O95398 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5□□□□□ -1.61
RAPGEF3O95398 AL645939.1-201ENST00000453429 797 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 AC092989.1-201ENST00000481235 277 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 APOOP4-201ENST00000513530 597 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 RNA5SP337-201ENST00000517007 109 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 AC022616.3-201ENST00000523940 148 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5□□□□□ -1.61
RAPGEF3O95398 AL512360.1-201ENST00000555346 234 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 SUB1P2-201ENST00000556401 297 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 AC025678.1-201ENST00000567861 338 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 NRBF2P5-201ENST00000603087 788 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 AP001596.2-201ENST00000608410 312 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 AC006338.1-201ENST00000618453 749 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5□□□□□ -1.61
RAPGEF3O95398 AC139792.3-201ENST00000623525 224 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 AC009161.2-201ENST00000624626 138 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5□□□□□ -1.61
RAPGEF3O95398 MIR1321-201ENST00000637766 79 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5□□□□□ -1.61
RAPGEF3O95398 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RAPGEF3O95398 AC138915.3-201ENST00000562908 1389 ntBASIC5□□□□□ -1.61
RAPGEF3O95398 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms