Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 RNU6-283P-201ENST00000364788 107 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 SNORD82-201ENST00000365530 70 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CDKL5O76039 AL391417.1-201ENST00000404100 426 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 FAT1P1-201ENST00000406588 507 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 CBWD4P-201ENST00000445695 655 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 snoU13.8-201ENST00000458890 104 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 RPL23AP41-201ENST00000484754 458 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 AP001086.1-201ENST00000494882 321 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.24□□□□□ -1.73
CDKL5O76039 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.24□□□□□ -1.73
CDKL5O76039 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.24□□□□□ -1.73
CDKL5O76039 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.24□□□□□ -1.73
CDKL5O76039 AC016065.2-201ENST00000514530 444 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 RNU6-579P-201ENST00000516879 102 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 AC078814.3-201ENST00000553036 491 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.24□□□□□ -1.73
CDKL5O76039 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.24□□□□□ -1.73
CDKL5O76039 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.24□□□□□ -1.73
CDKL5O76039 YWHAQP7-201ENST00000603536 658 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 AC013553.2-201ENST00000604244 589 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 AL050343.2-201ENST00000607338 280 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.24□□□□□ -1.73
CDKL5O76039 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CDKL5O76039 USP8P1-201ENST00000494673 3183 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
CDKL5O76039 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDKL5O76039 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
CDKL5O76039 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CDKL5O76039 FRG1CP-201ENST00000358464 769 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 RNU6-97P-201ENST00000363387 104 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 Y_RNA.166-201ENST00000363730 102 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 RN7SKP280-201ENST00000364196 304 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CDKL5O76039 SNORA57.1-201ENST00000391227 145 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 AL356967.1-201ENST00000406305 431 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 RNU6-373P-201ENST00000411247 98 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.23□□□□□ -1.73
CDKL5O76039 AC004987.3-201ENST00000413879 771 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.23□□□□□ -1.73
CDKL5O76039 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.23□□□□□ -1.73
CDKL5O76039 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.23□□□□□ -1.73
CDKL5O76039 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.23□□□□□ -1.73
CDKL5O76039 ARF4P2-201ENST00000430209 526 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 AC105402.2-201ENST00000438503 358 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 AL138799.3-201ENST00000438968 350 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.23□□□□□ -1.73
CDKL5O76039 AC104308.1-201ENST00000454621 333 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.23□□□□□ -1.73
CDKL5O76039 HMGN1P10-201ENST00000474557 553 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 UBE2CP3-201ENST00000502715 450 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 RNU6-1231P-201ENST00000517185 103 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 AP003497.1-201ENST00000528472 562 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.23□□□□□ -1.73
CDKL5O76039 OR4R1P-201ENST00000529879 463 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 OR4T1P-201ENST00000554933 911 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 AL121576.1-201ENST00000556055 276 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.23□□□□□ -1.73
CDKL5O76039 AC090615.1-201ENST00000577519 154 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.23□□□□□ -1.73
CDKL5O76039 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.23□□□□□ -1.73
CDKL5O76039 AC098848.2-201ENST00000588023 330 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 AC010525.2-201ENST00000590920 195 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.23□□□□□ -1.73
CDKL5O76039 AC068790.3-201ENST00000602988 553 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 AL354950.2-201ENST00000617939 290 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 AC112204.3-201ENST00000623822 332 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 AL159972.1-201ENST00000625150 448 ntBASIC4.23□□□□□ -1.73
CDKL5O76039 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.23□□□□□ -1.73
CDKL5O76039 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDKL5O76039 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CDKL5O76039 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CDKL5O76039 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.23□□□□□ -1.73
CDKL5O76039 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDKL5O76039 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CDKL5O76039 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
CDKL5O76039 AC006020.1-201ENST00000420179 1854 ntBASIC4.22□□□□□ -1.73
CDKL5O76039 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.22□□□□□ -1.73
CDKL5O76039 RIOK3P1-201ENST00000418778 1528 ntBASIC4.22□□□□□ -1.73
CDKL5O76039 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CDKL5O76039 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDKL5O76039 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
CDKL5O76039 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDKL5O76039 RNU6-74P-201ENST00000384235 107 ntBASIC4.22□□□□□ -1.73
CDKL5O76039 Y_RNA.460-201ENST00000384255 102 ntBASIC4.22□□□□□ -1.73
CDKL5O76039 U3.20-201ENST00000390909 217 ntBASIC4.22□□□□□ -1.73
CDKL5O76039 PTMAP5-201ENST00000393073 333 ntBASIC4.22□□□□□ -1.73
CDKL5O76039 AL162578.1-201ENST00000406202 378 ntBASIC4.22□□□□□ -1.73
CDKL5O76039 AC127526.1-201ENST00000417526 366 ntBASIC4.22□□□□□ -1.73
CDKL5O76039 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.22□□□□□ -1.73
CDKL5O76039 AL353678.1-201ENST00000422735 741 ntBASIC4.22□□□□□ -1.73
CDKL5O76039 FTH1P1-201ENST00000437933 532 ntBASIC4.22□□□□□ -1.73
CDKL5O76039 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.22□□□□□ -1.73
CDKL5O76039 AC108734.1-201ENST00000439549 399 ntBASIC4.22□□□□□ -1.73
CDKL5O76039 AC140076.1-201ENST00000449897 361 ntBASIC4.22□□□□□ -1.73
CDKL5O76039 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.22□□□□□ -1.73
CDKL5O76039 RNU7-63P-201ENST00000459054 62 ntBASIC4.22□□□□□ -1.73
CDKL5O76039 RN7SL330P-201ENST00000469709 307 ntBASIC4.22□□□□□ -1.73
CDKL5O76039 AC021382.1-201ENST00000483523 359 ntBASIC4.22□□□□□ -1.73
CDKL5O76039 HMGN1P13-201ENST00000505795 138 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms