Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
VPS4BO75351 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS4BO75351 MIR208A-201ENST00000362287 71 ntBASIC3.99□□□□□ -1.77
VPS4BO75351 Y_RNA.263-201ENST00000364659 114 ntBASIC3.99□□□□□ -1.77
VPS4BO75351 MIR124-3-201ENST00000384866 87 ntBASIC3.99□□□□□ -1.77
VPS4BO75351 MIR7-3-201ENST00000384898 110 ntBASIC3.99□□□□□ -1.77
VPS4BO75351 AL583835.1-201ENST00000399570 407 ntBASIC3.99□□□□□ -1.77
VPS4BO75351 RNA5SP36-201ENST00000410197 133 ntBASIC3.99□□□□□ -1.77
VPS4BO75351 RNU6-193P-201ENST00000410977 107 ntBASIC3.99□□□□□ -1.77
VPS4BO75351 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS4BO75351 AC008481.1-201ENST00000463278 396 ntBASIC3.99□□□□□ -1.77
VPS4BO75351 AC006512.1-201ENST00000468816 291 ntBASIC3.99□□□□□ -1.77
VPS4BO75351 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS4BO75351 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS4BO75351 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS4BO75351 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.99□□□□□ -1.77
VPS4BO75351 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.99□□□□□ -1.77
VPS4BO75351 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.99□□□□□ -1.77
VPS4BO75351 NCAPGP2-201ENST00000557911 754 ntBASIC3.99□□□□□ -1.77
VPS4BO75351 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS4BO75351 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.99□□□□□ -1.77
VPS4BO75351 AP001029.3-201ENST00000588063 596 ntBASIC3.99□□□□□ -1.77
VPS4BO75351 AC010525.2-201ENST00000590920 195 ntBASIC3.99□□□□□ -1.77
VPS4BO75351 XIAPP1-201ENST00000603162 600 ntBASIC3.99□□□□□ -1.77
VPS4BO75351 Y_RNA.804-201ENST00000615262 101 ntBASIC3.99□□□□□ -1.77
VPS4BO75351 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS4BO75351 AC010338.1-201ENST00000621823 717 ntBASIC3.99□□□□□ -1.77
VPS4BO75351 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS4BO75351 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS4BO75351 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS4BO75351 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS4BO75351 IPO8P1-201ENST00000455509 3109 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS4BO75351 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS4BO75351 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS4BO75351 Y_RNA.61-201ENST00000362835 102 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 RNU6-694P-201ENST00000364071 147 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 MIR514A2-201ENST00000385131 88 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 MIR514A3-201ENST00000385132 88 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 RNU6-882P-201ENST00000391025 103 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 RNU6-903P-201ENST00000391270 109 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 SNORA11.2-201ENST00000408318 127 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS4BO75351 AL356095.1-201ENST00000417217 199 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 SSXP9-201ENST00000417503 292 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 MTCYBP8-201ENST00000422855 651 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS4BO75351 AC004866.2-201ENST00000438285 481 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 RPS29P7-201ENST00000439662 171 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS4BO75351 AMD1P1-201ENST00000457220 922 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS4BO75351 VN1R105P-201ENST00000486595 910 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 RPL29P14-201ENST00000495837 428 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 RPS27AP13-201ENST00000498403 237 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 EIF4EP3-201ENST00000498782 656 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 AC092436.1-201ENST00000506450 503 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 LRRC34P2-201ENST00000514850 553 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 RNU7-143P-201ENST00000516781 65 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS4BO75351 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS4BO75351 AC125611.2-201ENST00000551907 647 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS4BO75351 RPL23AP87-202ENST00000573039 466 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.98□□□□□ -1.77
VPS4BO75351 MIR4424-201ENST00000585257 86 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 HMGN2P28-201ENST00000606102 262 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.98□□□□□ -1.77
VPS4BO75351 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS4BO75351 AC106871.1-201ENST00000568324 3102 ntBASIC3.98□□□□□ -1.77
VPS4BO75351 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS4BO75351 AL365440.1-201ENST00000436135 2167 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS4BO75351 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
VPS4BO75351 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS4BO75351 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS4BO75351 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS4BO75351 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
VPS4BO75351 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS4BO75351 OR4G1P-203ENST00000641984 1631 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 Y_RNA.166-201ENST00000363730 102 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 RNU6-61P-201ENST00000365528 109 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 RNU6-641P-201ENST00000384006 107 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 MIR449B-201ENST00000384995 97 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 AC110754.1-201ENST00000399740 601 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 MIR1251-201ENST00000408552 70 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 RNU2-29P-201ENST00000410423 189 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 YME1L1P1-201ENST00000429435 297 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.97□□□□□ -1.77
VPS4BO75351 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.97□□□□□ -1.77
VPS4BO75351 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 CBWD4P-201ENST00000445695 655 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 SNRPGP5-201ENST00000456003 220 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 RNA5SP246-201ENST00000458909 119 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 RPL7P49-201ENST00000471402 708 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 AC010631.1-201ENST00000474150 156 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS4BO75351 AC008958.1-201ENST00000511047 682 ntBASIC3.97□□□□□ -1.77
VPS4BO75351 RNA5SP49-201ENST00000516450 115 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms