Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
LDB3O75112 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
LDB3O75112 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LDB3O75112 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LDB3O75112 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LDB3O75112 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
LDB3O75112 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.4□□□□□ -1.86
LDB3O75112 RNU6-600P-201ENST00000362524 99 ntBASIC3.4□□□□□ -1.87
LDB3O75112 Y_RNA.86-201ENST00000363020 111 ntBASIC3.4□□□□□ -1.87
LDB3O75112 RNU4-76P-201ENST00000364509 141 ntBASIC3.4□□□□□ -1.87
LDB3O75112 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
LDB3O75112 SNORA5A-201ENST00000384111 134 ntBASIC3.4□□□□□ -1.87
LDB3O75112 RNU2-37P-201ENST00000410695 177 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AC127391.1-201ENST00000411737 98 ntBASIC3.4□□□□□ -1.87
LDB3O75112 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.4□□□□□ -1.87
LDB3O75112 GOT2P5-201ENST00000433995 546 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AL118496.2-201ENST00000448300 230 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AL133547.1-201ENST00000448546 220 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.4□□□□□ -1.87
LDB3O75112 snoU13.24-201ENST00000458998 104 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AC055855.1-201ENST00000489563 579 ntBASIC3.4□□□□□ -1.87
LDB3O75112 RPL23AP55-201ENST00000498163 452 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.4□□□□□ -1.87
LDB3O75112 AC104619.4-201ENST00000510773 249 ntBASIC3.4□□□□□ -1.87
LDB3O75112 MTND3P22-201ENST00000510932 243 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.4□□□□□ -1.87
LDB3O75112 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.4□□□□□ -1.87
LDB3O75112 CENPUP1-201ENST00000526649 1202 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.4□□□□□ -1.87
LDB3O75112 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.4□□□□□ -1.87
LDB3O75112 SUB1P2-201ENST00000556401 297 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AC034105.3-201ENST00000565294 442 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AL356432.3-201ENST00000568952 465 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.4□□□□□ -1.87
LDB3O75112 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.4□□□□□ -1.87
LDB3O75112 AC012507.3-201ENST00000603556 477 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AC006077.1-201ENST00000604746 343 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AL136363.1-201ENST00000605349 337 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.4□□□□□ -1.87
LDB3O75112 AL133173.2-201ENST00000614270 90 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AC010133.1-201ENST00000615809 842 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
LDB3O75112 AP003122.6-201ENST00000623831 495 ntBASIC3.4□□□□□ -1.87
LDB3O75112 AC091953.2-201ENST00000623979 160 ntBASIC3.4□□□□□ -1.87
LDB3O75112 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.4□□□□□ -1.87
LDB3O75112 AC012442.3-202ENST00000636742 206 ntBASIC3.4□□□□□ -1.87
LDB3O75112 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.4□□□□□ -1.87
LDB3O75112 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LDB3O75112 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.4□□□□□ -1.87
LDB3O75112 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LDB3O75112 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDB3O75112 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDB3O75112 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LDB3O75112 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LDB3O75112 SNORD9-201ENST00000362566 104 ntBASIC3.39□□□□□ -1.87
LDB3O75112 RNU6-451P-201ENST00000362921 107 ntBASIC3.39□□□□□ -1.87
LDB3O75112 RNU4-73P-201ENST00000363164 141 ntBASIC3.39□□□□□ -1.87
LDB3O75112 Y_RNA.263-201ENST00000364659 114 ntBASIC3.39□□□□□ -1.87
LDB3O75112 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
LDB3O75112 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDB3O75112 Y_RNA.573-201ENST00000384763 105 ntBASIC3.39□□□□□ -1.87
LDB3O75112 HSPE1P26-201ENST00000405341 275 ntBASIC3.39□□□□□ -1.87
LDB3O75112 MTHFD2P2-201ENST00000407725 247 ntBASIC3.39□□□□□ -1.87
LDB3O75112 ATP5A1P2-201ENST00000412323 255 ntBASIC3.39□□□□□ -1.87
LDB3O75112 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.39□□□□□ -1.87
LDB3O75112 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB3O75112 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.39□□□□□ -1.87
LDB3O75112 AC099677.1-201ENST00000420575 175 ntBASIC3.39□□□□□ -1.87
LDB3O75112 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.39□□□□□ -1.87
LDB3O75112 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LDB3O75112 RN7SKP18-201ENST00000516005 275 ntBASIC3.39□□□□□ -1.87
LDB3O75112 SNORA70.18-201ENST00000516696 98 ntBASIC3.39□□□□□ -1.87
LDB3O75112 RNU6-1073P-201ENST00000517182 106 ntBASIC3.39□□□□□ -1.87
LDB3O75112 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.39□□□□□ -1.87
LDB3O75112 AC008489.1-201ENST00000524271 483 ntBASIC3.39□□□□□ -1.87
LDB3O75112 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB3O75112 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.39□□□□□ -1.87
LDB3O75112 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LDB3O75112 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LDB3O75112 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.39□□□□□ -1.87
LDB3O75112 AC126177.3-201ENST00000551839 688 ntBASIC3.39□□□□□ -1.87
LDB3O75112 CBX3P5-201ENST00000552017 521 ntBASIC3.39□□□□□ -1.87
LDB3O75112 AL121576.1-201ENST00000556055 276 ntBASIC3.39□□□□□ -1.87
LDB3O75112 AC044792.1-201ENST00000593294 196 ntBASIC3.39□□□□□ -1.87
LDB3O75112 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.39□□□□□ -1.87
LDB3O75112 AC007621.1-201ENST00000604544 437 ntBASIC3.39□□□□□ -1.87
LDB3O75112 AL161734.1-201ENST00000609720 557 ntBASIC3.39□□□□□ -1.87
LDB3O75112 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.39□□□□□ -1.87
LDB3O75112 uc_338.32-201ENST00000615087 172 ntBASIC3.39□□□□□ -1.87
LDB3O75112 YWHAEP7-203ENST00000622054 312 ntBASIC3.39□□□□□ -1.87
LDB3O75112 AL034408.1-202ENST00000636088 415 ntBASIC3.39□□□□□ -1.87
LDB3O75112 AL732372.2-225ENST00000642124 456 ntBASIC3.39□□□□□ -1.87
LDB3O75112 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.39□□□□□ -1.87
LDB3O75112 AC116096.1-201ENST00000566804 2314 ntBASIC3.39□□□□□ -1.87
LDB3O75112 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LDB3O75112 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.39□□□□□ -1.87
LDB3O75112 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.39□□□□□ -1.87
LDB3O75112 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LDB3O75112 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
LDB3O75112 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms