Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC103710.4-201ENST00000609301 899 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 AC243773.3-201ENST00000613270 256 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 AC009159.1-201ENST00000618386 642 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 CTSLP2-204ENST00000629029 392 ntBASIC3.27□□□□□ -1.89
CACNA1FO60840 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.27□□□□□ -1.89
CACNA1FO60840 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CACNA1FO60840 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CACNA1FO60840 AL136360.1-201ENST00000503377 1900 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CACNA1FO60840 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CACNA1FO60840 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CACNA1FO60840 RN7SKP226-201ENST00000364912 300 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 Y_RNA.390-201ENST00000383932 102 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 RNU6-1122P-201ENST00000384449 107 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 FAT1P1-201ENST00000406588 507 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.26□□□□□ -1.89
CACNA1FO60840 EIF1P1-201ENST00000421436 341 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.26□□□□□ -1.89
CACNA1FO60840 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CACNA1FO60840 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CACNA1FO60840 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.26□□□□□ -1.89
CACNA1FO60840 C8orf59P1-201ENST00000429930 303 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.26□□□□□ -1.89
CACNA1FO60840 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.26□□□□□ -1.89
CACNA1FO60840 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.26□□□□□ -1.89
CACNA1FO60840 USP9YP35-201ENST00000435696 412 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 AC093392.2-201ENST00000450682 337 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 RPL23AP35-201ENST00000451906 501 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 RPL18AP17-201ENST00000455326 198 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CACNA1FO60840 AC013828.1-201ENST00000481845 158 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.26□□□□□ -1.89
CACNA1FO60840 RPS27P23-201ENST00000487608 251 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.26□□□□□ -1.89
CACNA1FO60840 RN7SKP96-201ENST00000516948 297 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 AP001189.2-201ENST00000527320 189 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.26□□□□□ -1.89
CACNA1FO60840 TPMTP1-201ENST00000592307 737 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.26□□□□□ -1.89
CACNA1FO60840 AF250324.2-201ENST00000608299 610 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 AC091304.9-201ENST00000612091 226 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.26□□□□□ -1.89
CACNA1FO60840 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CACNA1FO60840 ZNF37BP-203ENST00000452306 1352 ntBASIC3.26□□□□□ -1.89
CACNA1FO60840 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.26□□□□□ -1.89
CACNA1FO60840 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CACNA1FO60840 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.25□□□□□ -1.89
CACNA1FO60840 SNRPEP3-201ENST00000338402 276 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 SNORA31-201ENST00000362607 130 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CACNA1FO60840 AL450338.1-201ENST00000407987 512 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 AL136133.1-201ENST00000413694 376 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 PRELID3BP11-201ENST00000414230 479 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 AC009237.2-201ENST00000421358 284 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.25□□□□□ -1.89
CACNA1FO60840 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.25□□□□□ -1.89
CACNA1FO60840 AL365184.2-201ENST00000431139 435 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 MTATP6P23-201ENST00000440153 476 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.25□□□□□ -1.89
CACNA1FO60840 RPL7P59-201ENST00000447700 943 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.25□□□□□ -1.89
CACNA1FO60840 AP000873.1-201ENST00000463987 400 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.25□□□□□ -1.89
CACNA1FO60840 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.25□□□□□ -1.89
CACNA1FO60840 AC109471.1-201ENST00000511631 612 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.25□□□□□ -1.89
CACNA1FO60840 IGKV2-36-201ENST00000519999 223 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 DEFB108A-201ENST00000530110 222 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.25□□□□□ -1.89
CACNA1FO60840 CENPUP2-201ENST00000555897 1186 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 MIR3913-1-201ENST00000577744 102 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 AC091488.1-201ENST00000604239 660 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 AC103810.6-201ENST00000606708 136 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 AC012360.2-201ENST00000609349 391 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 AC138649.3-201ENST00000622154 254 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 C2orf27A-204ENST00000623058 969 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 MIR6863-201ENST00000636112 90 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
CACNA1FO60840 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.25□□□□□ -1.89
CACNA1FO60840 RNU6-501P-201ENST00000364072 100 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 AL360182.1-201ENST00000397433 468 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 AL359511.1-201ENST00000402970 211 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 RPL5P18-201ENST00000406671 891 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 RN7SKP123-201ENST00000410732 291 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 FCF1P2-201ENST00000415284 583 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 USP9YP20-201ENST00000419224 558 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.25□□□□□ -1.89
CACNA1FO60840 NEK4P1-201ENST00000433383 879 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 MTND3P21-201ENST00000433774 331 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 MTND2P20-201ENST00000440805 661 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 RBMX2P4-201ENST00000441256 376 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 MRPL50P4-201ENST00000446432 475 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 GSTA11P-201ENST00000452866 669 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.25□□□□□ -1.89
CACNA1FO60840 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.25□□□□□ -1.89
CACNA1FO60840 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CACNA1FO60840 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.25□□□□□ -1.89
CACNA1FO60840 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.25□□□□□ -1.89
CACNA1FO60840 SNORA70.14-201ENST00000516205 110 ntBASIC3.25□□□□□ -1.89
CACNA1FO60840 OR7K1P-201ENST00000546439 926 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms