Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.65□□□□□ -1.83
SMAD6O43541 RPL21P23-201ENST00000446654 460 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 HMGN3P1-201ENST00000453847 193 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 SNORD105B-201ENST00000458770 79 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 AC026410.2-201ENST00000460281 156 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 RPS20P20-201ENST00000460498 340 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 RPL36AP51-201ENST00000487216 318 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.65□□□□□ -1.83
SMAD6O43541 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.65□□□□□ -1.83
SMAD6O43541 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.65□□□□□ -1.83
SMAD6O43541 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.65□□□□□ -1.83
SMAD6O43541 AC022616.6-201ENST00000520479 119 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 COX6CP8-201ENST00000522620 226 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.65□□□□□ -1.83
SMAD6O43541 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.65□□□□□ -1.83
SMAD6O43541 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.65□□□□□ -1.83
SMAD6O43541 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.65□□□□□ -1.83
SMAD6O43541 AC008739.3-201ENST00000603262 127 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 AC024220.1-201ENST00000603675 484 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 AC006077.1-201ENST00000604746 343 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.65□□□□□ -1.83
SMAD6O43541 PART1_1.1-201ENST00000611761 217 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 AL133173.2-201ENST00000614270 90 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 AC090574.1-201ENST00000623186 233 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.65□□□□□ -1.83
SMAD6O43541 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
SMAD6O43541 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.65□□□□□ -1.83
SMAD6O43541 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMAD6O43541 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SMAD6O43541 PABPC1P7-201ENST00000413177 1513 ntBASIC3.65□□□□□ -1.83
SMAD6O43541 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMAD6O43541 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.64□□□□□ -1.83
SMAD6O43541 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SMAD6O43541 RNU6-1322P-201ENST00000364309 107 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 RNU6-343P-201ENST00000364709 104 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 RNU6-767P-201ENST00000384132 107 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 Y_RNA.548-201ENST00000384656 105 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 AC068050.1-201ENST00000394891 380 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMAD6O43541 OR9R1P-201ENST00000412200 877 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.64□□□□□ -1.83
SMAD6O43541 AC005517.2-201ENST00000424673 553 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 AL035410.1-201ENST00000427409 427 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 VDAC1P3-201ENST00000434069 851 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 AC073063.1-201ENST00000434352 607 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 TAAR7P-201ENST00000436141 242 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 YWHAZP8-201ENST00000436935 731 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.64□□□□□ -1.83
SMAD6O43541 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.64□□□□□ -1.83
SMAD6O43541 HMGN2P16-201ENST00000456802 261 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 HMGN1P13-201ENST00000505795 138 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 AC010486.1-201ENST00000511793 424 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 Vault.3-201ENST00000516676 95 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.64□□□□□ -1.83
SMAD6O43541 HSPA8P13-201ENST00000523715 472 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 AP005639.2-201ENST00000527592 928 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.64□□□□□ -1.83
SMAD6O43541 AC093027.1-201ENST00000546698 429 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 AC034105.3-201ENST00000565294 442 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.64□□□□□ -1.83
SMAD6O43541 AC011712.1-201ENST00000588959 234 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 YWHAQP7-201ENST00000603536 658 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 HSPE1P14-201ENST00000605812 302 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 AL050343.2-201ENST00000607338 280 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
SMAD6O43541 AC244100.1-202ENST00000621554 382 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 U4.6-201ENST00000621618 127 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 AC243312.2-201ENST00000623340 601 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 AC073073.2-201ENST00000609827 2578 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.64□□□□□ -1.83
SMAD6O43541 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMAD6O43541 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
SMAD6O43541 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.64□□□□□ -1.83
SMAD6O43541 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SMAD6O43541 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD6O43541 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD6O43541 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SMAD6O43541 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD6O43541 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD6O43541 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD6O43541 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 AC116096.1-201ENST00000566804 2314 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SMAD6O43541 RNU6-845P-201ENST00000362578 103 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 SNORD81.2-201ENST00000365153 76 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 RNU1-39P-201ENST00000383897 165 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 Y_RNA.460-201ENST00000384255 102 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 RNU6-921P-201ENST00000384361 107 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 MIR218-2-201ENST00000385006 110 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SMAD6O43541 RNU6-332P-201ENST00000391193 108 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 RPL23AP32-201ENST00000395315 459 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 RHEBP3-201ENST00000411920 351 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 AL354751.2-201ENST00000415471 210 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 AC017079.2-201ENST00000416102 485 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 PDCL2P1-201ENST00000419302 352 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 AF228730.4-201ENST00000421457 183 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 AL451062.2-201ENST00000427515 271 ntBASIC3.63□□□□□ -1.83
SMAD6O43541 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms