Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.22□□□□□ -1.73
PRPF3O43395 ARL2BPP2-201ENST00000550907 489 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.22□□□□□ -1.73
PRPF3O43395 AP003465.2-201ENST00000602571 373 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF3O43395 AL110115.1-201ENST00000614396 364 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PRPF3O43395 AF117829.1-206ENST00000621883 3802 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF3O43395 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF3O43395 AC068137.3-201ENST00000639191 341 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 AC073869.6-201ENST00000640656 341 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 AL161912.2-201ENST00000565707 3007 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF3O43395 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
PRPF3O43395 OTUD4P1-201ENST00000237841 3067 ntBASIC4.22□□□□□ -1.73
PRPF3O43395 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF3O43395 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF3O43395 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PRPF3O43395 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.21□□□□□ -1.73
PRPF3O43395 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRPF3O43395 CUL1P1-201ENST00000509510 2425 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRPF3O43395 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.21□□□□□ -1.74
PRPF3O43395 Y_RNA.1-201ENST00000352915 104 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF3O43395 RNU6-741P-201ENST00000383889 107 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 NDUFS5P1-201ENST00000405668 289 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 RNU2-36P-201ENST00000410361 191 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC4.21□□□□□ -1.74
PRPF3O43395 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF3O43395 AC007389.2-201ENST00000434630 306 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 MTND1P4-201ENST00000435196 415 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF3O43395 AC009237.8-201ENST00000445492 379 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 GAPDHP27-201ENST00000447427 1020 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF3O43395 RPS23P3-201ENST00000470993 430 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 RPL30P5-201ENST00000494923 336 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF3O43395 RN7SKP13-201ENST00000515933 244 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 RANP9-201ENST00000519957 271 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 OR4R1P-201ENST00000529879 463 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PRPF3O43395 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.21□□□□□ -1.74
PRPF3O43395 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF3O43395 AL512310.1-201ENST00000548639 172 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 SUB1P2-201ENST00000556401 297 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF3O43395 AC136619.2-201ENST00000563361 631 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 HMGB1P6-201ENST00000569046 646 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF3O43395 AC002545.1-201ENST00000592511 181 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 AC104763.2-201ENST00000604179 382 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 AC007684.1-201ENST00000609671 477 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 AC017083.3-201ENST00000609955 700 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 AC004696.1-201ENST00000614345 607 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 AL158209.2-201ENST00000619266 216 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 AC244205.2-202ENST00000635781 342 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 AL732372.2-225ENST00000642124 456 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
PRPF3O43395 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRPF3O43395 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PRPF3O43395 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.21□□□□□ -1.74
PRPF3O43395 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRPF3O43395 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRPF3O43395 RPS4XP5-202ENST00000449995 1334 ntBASIC4.21□□□□□ -1.74
PRPF3O43395 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
PRPF3O43395 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF3O43395 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF3O43395 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PRPF3O43395 OR5J1P-201ENST00000313544 939 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 RNA5SP295-201ENST00000362655 121 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 RNA5SP124-201ENST00000362739 110 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 AL359837.1-201ENST00000381357 287 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 RNU6-606P-201ENST00000384721 111 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 AL391417.1-201ENST00000404100 426 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF3O43395 RAB9AP3-201ENST00000412737 573 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 MTATP6P18-201ENST00000417994 673 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 AL035423.1-201ENST00000420331 213 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF3O43395 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.2□□□□□ -1.74
PRPF3O43395 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF3O43395 RAB9AP1-201ENST00000449393 573 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF3O43395 RPL9P32-201ENST00000464118 620 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.2□□□□□ -1.74
PRPF3O43395 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.2□□□□□ -1.74
PRPF3O43395 AC126182.1-201ENST00000478134 357 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 AL049874.1-201ENST00000489560 388 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.2□□□□□ -1.74
PRPF3O43395 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.2□□□□□ -1.74
PRPF3O43395 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
PRPF3O43395 SNORA31.3-201ENST00000516029 96 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 MTND1P5-201ENST00000517906 940 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 HMGB1P41-201ENST00000520234 440 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 OR5G4P-201ENST00000525251 760 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 AP001893.2-201ENST00000526949 202 ntBASIC4.2□□□□□ -1.74
PRPF3O43395 OR5BN1P-201ENST00000532955 829 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms