Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AL355073.2-201ENST00000612106 557 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 AC012409.4-201ENST00000612923 249 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.93□□□□□ -1.78
PHGDHO43175 AC024940.5-201ENST00000622889 474 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 MIR3662-201ENST00000637030 95 ntBASIC3.93□□□□□ -1.78
PHGDHO43175 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PHGDHO43175 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PHGDHO43175 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
PHGDHO43175 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
PHGDHO43175 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.92□□□□□ -1.78
PHGDHO43175 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.92□□□□□ -1.78
PHGDHO43175 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.92□□□□□ -1.78
PHGDHO43175 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
PHGDHO43175 NACAP2-201ENST00000318548 624 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 RNU6-1287P-201ENST00000362914 107 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 RNU6-1060P-201ENST00000384664 107 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PHGDHO43175 HSPE1P8-201ENST00000406997 288 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 RNU6-1068P-201ENST00000410958 103 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 RNU6-387P-201ENST00000411331 105 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.92□□□□□ -1.78
PHGDHO43175 NDUFB4P7-201ENST00000423198 363 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.92□□□□□ -1.78
PHGDHO43175 AC091390.3-201ENST00000426478 338 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.92□□□□□ -1.78
PHGDHO43175 TBCAP1-201ENST00000436520 327 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 HMGB1P31-201ENST00000437242 427 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 MTND4P25-201ENST00000441039 533 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 RANP8-201ENST00000444720 713 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.92□□□□□ -1.78
PHGDHO43175 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.92□□□□□ -1.78
PHGDHO43175 RPS4XP13-201ENST00000483219 789 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.92□□□□□ -1.78
PHGDHO43175 AC092436.1-201ENST00000506450 503 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 RNU6-927P-201ENST00000516199 100 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 Y_RNA.689-201ENST00000516589 107 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 RNA5SP309-201ENST00000516670 106 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 RN7SKP219-201ENST00000516825 296 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.92□□□□□ -1.78
PHGDHO43175 IGKV2D-19-201ENST00000523346 262 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.92□□□□□ -1.78
PHGDHO43175 AP003730.1-201ENST00000524605 285 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 AP001804.3-201ENST00000525146 880 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.92□□□□□ -1.78
PHGDHO43175 RANP3-201ENST00000530970 276 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.92□□□□□ -1.78
PHGDHO43175 ADI1P3-201ENST00000549509 470 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.92□□□□□ -1.78
PHGDHO43175 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.92□□□□□ -1.78
PHGDHO43175 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.92□□□□□ -1.78
PHGDHO43175 BNIP3P30-201ENST00000601184 574 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 AC174048.1-201ENST00000603389 144 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 AL020991.1-201ENST00000612314 373 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 AP001486.3-201ENST00000615334 372 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 AL445567.2-201ENST00000618935 498 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 uc_338.11-201ENST00000619132 160 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.92□□□□□ -1.78
PHGDHO43175 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.92□□□□□ -1.78
PHGDHO43175 AC008568.2-201ENST00000623862 2313 ntBASIC3.92□□□□□ -1.78
PHGDHO43175 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PHGDHO43175 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
PHGDHO43175 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PHGDHO43175 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.91□□□□□ -1.78
PHGDHO43175 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PHGDHO43175 RNU6-451P-201ENST00000362921 107 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AL354719.1-201ENST00000406535 843 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 RNU2-29P-201ENST00000410423 189 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 Y_RNA.625-201ENST00000411256 107 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AC092809.3-201ENST00000415453 231 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AC068533.1-201ENST00000418542 415 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 BTF3L4P3-201ENST00000418879 476 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.91□□□□□ -1.78
PHGDHO43175 SNRPEP10-201ENST00000420249 274 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AL109913.1-201ENST00000421173 514 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.91□□□□□ -1.78
PHGDHO43175 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.91□□□□□ -1.78
PHGDHO43175 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.91□□□□□ -1.78
PHGDHO43175 AL590383.1-201ENST00000428602 75 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AC083863.1-201ENST00000438811 231 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.91□□□□□ -1.78
PHGDHO43175 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.91□□□□□ -1.78
PHGDHO43175 RPL37P6-201ENST00000460682 294 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.91□□□□□ -1.78
PHGDHO43175 AL132838.2-201ENST00000492041 314 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.91□□□□□ -1.78
PHGDHO43175 RBBP4P6-201ENST00000508098 202 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 RNU6-123P-201ENST00000516163 102 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 RANP9-201ENST00000519957 271 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.91□□□□□ -1.78
PHGDHO43175 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.91□□□□□ -1.78
PHGDHO43175 AC004024.1-201ENST00000549244 247 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 HIF1AP1-201ENST00000553642 175 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AP005205.1-201ENST00000563503 508 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.91□□□□□ -1.78
PHGDHO43175 AC008521.1-201ENST00000587471 187 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AC008945.2-201ENST00000606056 604 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
PHGDHO43175 DISC2.1-201ENST00000612827 205 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AC048347.1-201ENST00000624621 427 ntBASIC3.91□□□□□ -1.78
PHGDHO43175 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms