Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC009974.1-201ENST00000608881 455 ntBASIC2.75□□□□□ -1.97
MSH4O15457 AP003122.6-201ENST00000623831 495 ntBASIC2.75□□□□□ -1.97
MSH4O15457 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.75□□□□□ -1.97
MSH4O15457 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
MSH4O15457 AP000776.1-201ENST00000530032 1663 ntBASIC2.75□□□□□ -1.97
MSH4O15457 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.75□□□□□ -1.97
MSH4O15457 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
MSH4O15457 MAPK10-266ENST00000641066 6555 ntBASIC2.74□□□□□ -1.97
MSH4O15457 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
MSH4O15457 RNU6-301P-201ENST00000384277 107 ntBASIC2.74□□□□□ -1.97
MSH4O15457 SNORA36C-201ENST00000384289 132 ntBASIC2.74□□□□□ -1.97
MSH4O15457 AL356421.1-201ENST00000403255 413 ntBASIC2.74□□□□□ -1.97
MSH4O15457 AL162578.1-201ENST00000406202 378 ntBASIC2.74□□□□□ -1.97
MSH4O15457 PPP1R11P2-201ENST00000423543 382 ntBASIC2.74□□□□□ -1.97
MSH4O15457 RPL36AP6-201ENST00000435770 321 ntBASIC2.74□□□□□ -1.97
MSH4O15457 MTCO2P20-201ENST00000437339 673 ntBASIC2.74□□□□□ -1.97
MSH4O15457 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.74□□□□□ -1.97
MSH4O15457 MTND3P1-201ENST00000441336 220 ntBASIC2.74□□□□□ -1.97
MSH4O15457 USP9YP10-201ENST00000454868 628 ntBASIC2.74□□□□□ -1.97
MSH4O15457 AC104472.2-201ENST00000469035 601 ntBASIC2.74□□□□□ -1.97
MSH4O15457 RPL7P18-201ENST00000478965 734 ntBASIC2.74□□□□□ -1.97
MSH4O15457 AC021382.1-201ENST00000483523 359 ntBASIC2.74□□□□□ -1.97
MSH4O15457 RPL36AP51-201ENST00000487216 318 ntBASIC2.74□□□□□ -1.97
MSH4O15457 AL049874.1-201ENST00000489560 388 ntBASIC2.74□□□□□ -1.97
MSH4O15457 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.74□□□□□ -1.97
MSH4O15457 AC147055.4-201ENST00000504399 745 ntBASIC2.74□□□□□ -1.97
MSH4O15457 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC2.74□□□□□ -1.97
MSH4O15457 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.74□□□□□ -1.97
MSH4O15457 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
MSH4O15457 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.74□□□□□ -1.97
MSH4O15457 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.74□□□□□ -1.97
MSH4O15457 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.74□□□□□ -1.97
MSH4O15457 AC092953.2-201ENST00000608000 699 ntBASIC2.74□□□□□ -1.97
MSH4O15457 AC131902.3-201ENST00000611767 581 ntBASIC2.74□□□□□ -1.97
MSH4O15457 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.74□□□□□ -1.97
MSH4O15457 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
MSH4O15457 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.74□□□□□ -1.97
MSH4O15457 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.74□□□□□ -1.97
MSH4O15457 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
MSH4O15457 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
MSH4O15457 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
MSH4O15457 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
MSH4O15457 RNU6-1078P-201ENST00000364522 103 ntBASIC2.73□□□□□ -1.97
MSH4O15457 RNU6-744P-201ENST00000365557 107 ntBASIC2.73□□□□□ -1.97
MSH4O15457 RNU6-1316P-201ENST00000384242 108 ntBASIC2.73□□□□□ -1.97
MSH4O15457 ELOCP9-201ENST00000418624 239 ntBASIC2.73□□□□□ -1.97
MSH4O15457 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.73□□□□□ -1.97
MSH4O15457 AC084290.1-201ENST00000434995 374 ntBASIC2.73□□□□□ -1.97
MSH4O15457 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.73□□□□□ -1.97
MSH4O15457 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.73□□□□□ -1.97
MSH4O15457 RPL39P40-201ENST00000445481 146 ntBASIC2.73□□□□□ -1.97
MSH4O15457 AC104389.3-201ENST00000445629 235 ntBASIC2.73□□□□□ -1.97
MSH4O15457 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.73□□□□□ -1.97
MSH4O15457 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.73□□□□□ -1.97
MSH4O15457 RPL30P5-201ENST00000494923 336 ntBASIC2.73□□□□□ -1.97
MSH4O15457 AC093281.2-201ENST00000510153 597 ntBASIC2.73□□□□□ -1.97
MSH4O15457 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.73□□□□□ -1.97
MSH4O15457 AP000867.2-201ENST00000532468 320 ntBASIC2.73□□□□□ -1.97
MSH4O15457 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.73□□□□□ -1.97
MSH4O15457 AL512310.1-201ENST00000548639 172 ntBASIC2.73□□□□□ -1.97
MSH4O15457 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.73□□□□□ -1.97
MSH4O15457 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.73□□□□□ -1.97
MSH4O15457 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC2.73□□□□□ -1.97
MSH4O15457 AL049838.1-201ENST00000563647 981 ntBASIC2.73□□□□□ -1.97
MSH4O15457 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.73□□□□□ -1.97
MSH4O15457 AC061975.8-201ENST00000587058 721 ntBASIC2.73□□□□□ -1.97
MSH4O15457 AC090186.1-201ENST00000605991 572 ntBASIC2.73□□□□□ -1.97
MSH4O15457 AC103810.6-201ENST00000606708 136 ntBASIC2.73□□□□□ -1.97
MSH4O15457 AC097478.2-201ENST00000610572 514 ntBASIC2.73□□□□□ -1.97
MSH4O15457 AC016597.2-201ENST00000613256 341 ntBASIC2.73□□□□□ -1.97
MSH4O15457 AC013470.4-201ENST00000619978 986 ntBASIC2.73□□□□□ -1.97
MSH4O15457 AC091046.2-201ENST00000620775 665 ntBASIC2.73□□□□□ -1.97
MSH4O15457 AC079228.1-201ENST00000624774 1049 ntBASIC2.73□□□□□ -1.97
MSH4O15457 OR4G3P-201ENST00000633500 913 ntBASIC2.73□□□□□ -1.97
MSH4O15457 AC016717.2-201ENST00000609089 5141 ntBASIC2.73□□□□□ -1.97
MSH4O15457 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
MSH4O15457 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.73□□□□□ -1.97
MSH4O15457 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
MSH4O15457 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
MSH4O15457 RNU5E-8P-201ENST00000363502 116 ntBASIC2.72□□□□□ -1.97
MSH4O15457 RNU6-777P-201ENST00000364265 104 ntBASIC2.72□□□□□ -1.97
MSH4O15457 CD24P4-201ENST00000382840 243 ntBASIC2.72□□□□□ -1.97
MSH4O15457 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.72□□□□□ -1.97
MSH4O15457 AL139413.1-201ENST00000421309 217 ntBASIC2.72□□□□□ -1.97
MSH4O15457 AC234781.2-201ENST00000426370 994 ntBASIC2.72□□□□□ -1.97
MSH4O15457 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.72□□□□□ -1.97
MSH4O15457 AL356867.1-201ENST00000429623 299 ntBASIC2.72□□□□□ -1.97
MSH4O15457 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.72□□□□□ -1.97
MSH4O15457 AC098826.1-201ENST00000433943 471 ntBASIC2.72□□□□□ -1.97
MSH4O15457 FGF7P5-201ENST00000441829 291 ntBASIC2.72□□□□□ -1.97
MSH4O15457 PAXBP1P1-201ENST00000449315 447 ntBASIC2.72□□□□□ -1.97
MSH4O15457 SNRPGP6-201ENST00000451124 220 ntBASIC2.72□□□□□ -1.97
MSH4O15457 AC128713.1-201ENST00000471495 306 ntBASIC2.72□□□□□ -1.97
MSH4O15457 RN7SL429P-201ENST00000479090 223 ntBASIC2.72□□□□□ -1.97
MSH4O15457 RN7SL489P-201ENST00000486185 223 ntBASIC2.72□□□□□ -1.97
MSH4O15457 RN7SL327P-201ENST00000488659 223 ntBASIC2.72□□□□□ -1.97
MSH4O15457 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.72□□□□□ -1.97
MSH4O15457 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.72□□□□□ -1.97
MSH4O15457 AC234781.5-201ENST00000508429 271 ntBASIC2.72□□□□□ -1.97
MSH4O15457 AC026436.1-201ENST00000510537 270 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms