Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
FOXN1O15353 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXN1O15353 OR11H5P-202ENST00000641612 1325 ntBASIC4.38□□□□□ -1.71
FOXN1O15353 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.38□□□□□ -1.71
FOXN1O15353 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN1O15353 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXN1O15353 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
FOXN1O15353 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FOXN1O15353 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
FOXN1O15353 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXN1O15353 AC007823.1-201ENST00000569932 1566 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
FOXN1O15353 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXN1O15353 SNORD9-201ENST00000362566 104 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 RNA5SP322-201ENST00000363617 119 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 RNU6-657P-201ENST00000383904 107 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 RNU6-474P-201ENST00000384243 107 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 Y_RNA.474-201ENST00000384341 102 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 RNU1-89P-201ENST00000384592 164 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 MIR559-201ENST00000385188 96 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
FOXN1O15353 MTATP6P18-201ENST00000417994 673 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 OR1AA1P-201ENST00000419597 916 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.37□□□□□ -1.71
FOXN1O15353 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXN1O15353 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.37□□□□□ -1.71
FOXN1O15353 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN1O15353 RBMY2UP-201ENST00000453474 324 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN1O15353 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN1O15353 ELOCP31-201ENST00000540463 467 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN1O15353 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN1O15353 AC090502.2-201ENST00000549267 280 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN1O15353 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXN1O15353 AC006116.10-201ENST00000591836 581 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 VN1R84P-201ENST00000593697 235 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 MIR486-1-201ENST00000612171 68 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 AC090971.5-201ENST00000621102 293 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 BMS1P21-201ENST00000634565 365 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXN1O15353 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXN1O15353 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
FOXN1O15353 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXN1O15353 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXN1O15353 AC022031.1-201ENST00000585985 2593 ntBASIC4.37□□□□□ -1.71
FOXN1O15353 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXN1O15353 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXN1O15353 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.36□□□□□ -1.71
FOXN1O15353 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXN1O15353 FAM35DP-201ENST00000323387 2712 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 RNU6-223P-201ENST00000362830 107 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 Y_RNA.128-201ENST00000363391 112 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 Y_RNA.184-201ENST00000363884 108 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 SNORA32.2-201ENST00000384049 122 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
FOXN1O15353 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 TXNP7-201ENST00000406296 293 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 RNU6-1148P-201ENST00000410992 104 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 RNU6-272P-201ENST00000411028 104 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 RN7SKP140-201ENST00000411196 284 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.36□□□□□ -1.71
FOXN1O15353 AC073069.1-201ENST00000428657 441 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 AC236972.2-201ENST00000434979 310 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 AL121890.1-201ENST00000435457 205 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 AL031663.1-201ENST00000437445 219 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 SNRPEP7-201ENST00000438350 220 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 TRAPPC2P8-201ENST00000440676 396 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXN1O15353 AL354710.1-201ENST00000453641 246 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.36□□□□□ -1.71
FOXN1O15353 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXN1O15353 RNA5SP208-201ENST00000516156 78 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 Y_RNA.673-201ENST00000516306 88 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 IGKV2-36-201ENST00000519999 223 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.36□□□□□ -1.71
FOXN1O15353 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.36□□□□□ -1.71
FOXN1O15353 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.36□□□□□ -1.71
FOXN1O15353 AC090751.1-201ENST00000566966 267 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.36□□□□□ -1.71
FOXN1O15353 AC008737.2-201ENST00000599446 118 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.36□□□□□ -1.71
FOXN1O15353 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
FOXN1O15353 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.36□□□□□ -1.71
FOXN1O15353 CEP170P1-201ENST00000502249 4587 ntBASIC4.36□□□□□ -1.71
FOXN1O15353 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXN1O15353 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXN1O15353 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
FOXN1O15353 MTND5P16-201ENST00000460269 1703 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXN1O15353 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.35□□□□□ -1.71
FOXN1O15353 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXN1O15353 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXN1O15353 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
FOXN1O15353 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
FOXN1O15353 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
FOXN1O15353 RNU6-251P-201ENST00000363235 104 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 SNORA4.3-201ENST00000365564 137 ntBASIC4.35□□□□□ -1.71
FOXN1O15353 Y_RNA.384-201ENST00000383909 102 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms