Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
CDX4O14627 AC012669.1-201ENST00000603209 283 ntBASIC2.79□□□□□ -1.96
CDX4O14627 AC012557.2-201ENST00000605919 418 ntBASIC2.79□□□□□ -1.96
CDX4O14627 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.79□□□□□ -1.96
CDX4O14627 AL031667.3-201ENST00000620124 655 ntBASIC2.79□□□□□ -1.96
CDX4O14627 AL360181.4-201ENST00000621752 134 ntBASIC2.79□□□□□ -1.96
CDX4O14627 AC092192.1-201ENST00000633154 1018 ntBASIC2.79□□□□□ -1.96
CDX4O14627 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CDX4O14627 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC2.79□□□□□ -1.96
CDX4O14627 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CDX4O14627 AC007496.3-201ENST00000624987 3443 ntBASIC2.78□□□□□ -1.96
CDX4O14627 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CDX4O14627 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.78□□□□□ -1.96
CDX4O14627 ASNSP3-201ENST00000451989 1306 ntBASIC2.78□□□□□ -1.96
CDX4O14627 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDX4O14627 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CDX4O14627 RPL21P132-201ENST00000331267 462 ntBASIC2.78□□□□□ -1.96
CDX4O14627 Y_RNA.77-201ENST00000362962 107 ntBASIC2.78□□□□□ -1.96
CDX4O14627 RNU4-24P-201ENST00000364565 139 ntBASIC2.78□□□□□ -1.96
CDX4O14627 MIR184-201ENST00000384962 84 ntBASIC2.78□□□□□ -1.96
CDX4O14627 SNORA26.8-201ENST00000391306 124 ntBASIC2.78□□□□□ -1.96
CDX4O14627 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX4O14627 CCDC58P2-201ENST00000417131 366 ntBASIC2.78□□□□□ -1.96
CDX4O14627 AC127526.1-201ENST00000417526 366 ntBASIC2.78□□□□□ -1.96
CDX4O14627 BEND7P1-201ENST00000422058 457 ntBASIC2.78□□□□□ -1.96
CDX4O14627 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX4O14627 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.78□□□□□ -1.96
CDX4O14627 DLGAP5P1-201ENST00000430307 464 ntBASIC2.78□□□□□ -1.96
CDX4O14627 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.78□□□□□ -1.96
CDX4O14627 AC112653.1-201ENST00000443851 386 ntBASIC2.78□□□□□ -1.96
CDX4O14627 AL353691.1-201ENST00000451332 387 ntBASIC2.78□□□□□ -1.96
CDX4O14627 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.78□□□□□ -1.96
CDX4O14627 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX4O14627 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.78□□□□□ -1.96
CDX4O14627 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.78□□□□□ -1.96
CDX4O14627 KLHL2P1-201ENST00000508691 521 ntBASIC2.78□□□□□ -1.96
CDX4O14627 AC008549.1-201ENST00000512900 643 ntBASIC2.78□□□□□ -1.96
CDX4O14627 MTCYBP43-201ENST00000513621 740 ntBASIC2.78□□□□□ -1.96
CDX4O14627 MTND5P4-201ENST00000514978 288 ntBASIC2.78□□□□□ -1.96
CDX4O14627 RNA5SP24-201ENST00000516478 95 ntBASIC2.78□□□□□ -1.96
CDX4O14627 RNA5SP468-201ENST00000516782 93 ntBASIC2.78□□□□□ -1.96
CDX4O14627 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX4O14627 AC068587.4-201ENST00000533893 186 ntBASIC2.78□□□□□ -1.96
CDX4O14627 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CDX4O14627 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CDX4O14627 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX4O14627 AC087481.2-201ENST00000565492 330 ntBASIC2.78□□□□□ -1.96
CDX4O14627 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX4O14627 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX4O14627 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX4O14627 AC011451.2-201ENST00000604303 598 ntBASIC2.78□□□□□ -1.96
CDX4O14627 AL591516.1-201ENST00000611326 274 ntBASIC2.78□□□□□ -1.96
CDX4O14627 MIR6817-201ENST00000615588 66 ntBASIC2.78□□□□□ -1.96
CDX4O14627 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.78□□□□□ -1.96
CDX4O14627 AC098679.4-201ENST00000624241 654 ntBASIC2.78□□□□□ -1.96
CDX4O14627 AC073476.4-201ENST00000628409 72 ntBASIC2.78□□□□□ -1.96
CDX4O14627 PCMTD1P7-201ENST00000634506 357 ntBASIC2.78□□□□□ -1.96
CDX4O14627 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.78□□□□□ -1.96
CDX4O14627 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CDX4O14627 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.78□□□□□ -1.96
CDX4O14627 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.78□□□□□ -1.97
CDX4O14627 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CDX4O14627 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.77□□□□□ -1.97
CDX4O14627 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDX4O14627 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CDX4O14627 RNU6-500P-201ENST00000362349 107 ntBASIC2.77□□□□□ -1.97
CDX4O14627 RNU6-97P-201ENST00000363387 104 ntBASIC2.77□□□□□ -1.97
CDX4O14627 RNU6-1155P-201ENST00000363554 107 ntBASIC2.77□□□□□ -1.97
CDX4O14627 Y_RNA.234-201ENST00000364409 97 ntBASIC2.77□□□□□ -1.97
CDX4O14627 RNU6-359P-201ENST00000365466 108 ntBASIC2.77□□□□□ -1.97
CDX4O14627 RNA5SP88-201ENST00000365560 109 ntBASIC2.77□□□□□ -1.97
CDX4O14627 RNU6-723P-201ENST00000383973 107 ntBASIC2.77□□□□□ -1.97
CDX4O14627 RNA5SP293-201ENST00000410527 113 ntBASIC2.77□□□□□ -1.97
CDX4O14627 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.77□□□□□ -1.97
CDX4O14627 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.77□□□□□ -1.97
CDX4O14627 AC003685.2-201ENST00000422795 395 ntBASIC2.77□□□□□ -1.97
CDX4O14627 DUTP6-201ENST00000425573 462 ntBASIC2.77□□□□□ -1.97
CDX4O14627 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.77□□□□□ -1.97
CDX4O14627 UBE2FP3-201ENST00000436366 524 ntBASIC2.77□□□□□ -1.97
CDX4O14627 MTCYBP39-201ENST00000437562 491 ntBASIC2.77□□□□□ -1.97
CDX4O14627 RABEPKP1-201ENST00000440529 1026 ntBASIC2.77□□□□□ -1.97
CDX4O14627 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.77□□□□□ -1.97
CDX4O14627 AL162389.1-201ENST00000449233 177 ntBASIC2.77□□□□□ -1.97
CDX4O14627 AC234775.1-201ENST00000454247 670 ntBASIC2.77□□□□□ -1.97
CDX4O14627 ARPC3P2-201ENST00000457786 533 ntBASIC2.77□□□□□ -1.97
CDX4O14627 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.77□□□□□ -1.97
CDX4O14627 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
CDX4O14627 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.77□□□□□ -1.97
CDX4O14627 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.77□□□□□ -1.97
CDX4O14627 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.77□□□□□ -1.97
CDX4O14627 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.77□□□□□ -1.97
CDX4O14627 OR7K1P-201ENST00000546439 926 ntBASIC2.77□□□□□ -1.97
CDX4O14627 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.77□□□□□ -1.97
CDX4O14627 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.77□□□□□ -1.97
CDX4O14627 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.77□□□□□ -1.97
CDX4O14627 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC2.77□□□□□ -1.97
CDX4O14627 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.77□□□□□ -1.97
CDX4O14627 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.77□□□□□ -1.97
CDX4O14627 AC119751.7-201ENST00000600494 245 ntBASIC2.77□□□□□ -1.97
CDX4O14627 RN7SKP299-201ENST00000606679 301 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms